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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-19 00:13:33 +00:00
freebsd-ports/science
Fernando Apesteguía ce0ee4f1b4 science/afni: update to 23.3.08
While here fix PKG_COMPRESSION_LEVEL
2023-11-19 19:02:12 +01:00
..
2d-rewriter
abinit
afni science/afni: update to 23.3.08 2023-11-19 19:02:12 +01:00
agrum
aircraft-datcom
ALPSCore
antioch
apbs
arbor
ascent
atompaw
avogadro2
avogadrolibs
axom
bagel
bddsolve
berkeleygw
bodr
bout++
bout++-merging-filaments
buddy
cantera science/cantera: Fix build on FreeBSD 12 2023-11-15 05:19:39 +08:00
cardioid
cdf
cdk
cdo
cgnslib
cgribex
checkmol
chemical-mime-data
chemicalfun
chemps2
chemtool
chemtool-devel
chimes-calculator
ChipmunkPhysics
chrono
cif-tools
clhep
clipper
code_saturne science/PETSc: update 3.19.6 → 3.20.1 2023-11-07 19:56:43 -08:00
colt
conduit
coordgenlibs
cp2k
cp2k-data
csvtk
dakota devel/icu: update to 74.1 2023-11-17 12:46:00 +01:00
dalton
dd_package
devisor
dftbplus
dftd3
dftd4
dimod
dirac science/dirac: Fix build by adding USES=localbase:ldflags 2023-11-19 01:36:25 -08:00
dkh
dlib-cpp
drawxtl
dssp
dvc
dwave-preprocessing
dynare
eccodes
elk science/elk: update 8.8.26 → 9.2.5 2023-11-14 18:41:04 -08:00
elmerfem
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
feff10
fleur
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gbtolib
gchemutils
gcp
gdma
geant4
gemmi
getdp
ghemical
ghmm
gnudatalanguage
gpaw-setups
gramps
grib_api
gromacs
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf
hdf5
hdf5-18
hdf5-110
healpix
helfem
hepmc3
highfive
hypre
iboview
InsightToolkit
InsightToolkit501
isaac-cfd
jdftx
jmol
jstrack
kalzium KDE: Update KDE Gear to 23.08.3 2023-11-09 18:48:50 +01:00
kim-api
kplib
kst2
lammps
lamprop
latte
libaec
libccp4
libcifpp
libcint science/libcint: update 5.4.0 → 6.1.0 2023-11-12 02:24:00 -08:00
libctl
libecpint
libefp
libgeodecomp
libgetar
libghemical
libgridxc
libint
libint2
libint2-psi4
libkml science/libkml: Fix linking with CMake >= 3.27 2023-11-08 00:36:35 -05:00
liblinear
libmbd
libmsym
libnegf
liboglappth
libquantum
libssm
libsvm
libsvm-python
libtensorflow1
libvdwxc
libxc
liggghts
linux-zotero
luscus
m-aneos
madness
maeparser
massxpert
mbdyn
mcpl science/mcpl: New port: Monte Carlo Particle Lists library 2023-11-08 21:43:56 -08:00
mcstas
mcstas-comps
mctc-lib
mcxtrace
mcxtrace-comps
mdynamix
medit
meep
mercantile
metaphysicl
minc2
mmdb2
mmtf-cpp
mol2ps
molgif
molscript
molsketch
mopac
mp2d
mpb
mpqc
mrchem
mrcpp
msms
mstore
multicharge
multiwfn
mutationpp
namd
ncrystal science/ncrystal: New port: Library for thermal neutron transport in crystals and other materials 2023-11-07 19:56:42 -08:00
nest
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nlcglib
nwchem
nwchem-data
ocean
octopus
openbabel
openems
openkim-models
openmc
openmodelica
openmolcas
openmx
opensim-core
opensph
opsin
orthanc devel/icu: update to 74.1 2023-11-17 12:46:00 +01:00
orthanc-dicomweb devel/icu: update to 74.1 2023-11-17 12:46:00 +01:00
orthanc-mysql
orthanc-postgresql
orthanc-webviewer devel/icu: update to 74.1 2023-11-17 12:46:00 +01:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2
paje
paraview devel/icu: update to 74.1 2023-11-17 12:46:00 +01:00
pastix science/pastix: upgrade to v6.3.1 2023-11-17 19:04:20 +01:00
pcmsolver
PETSc science/PETSc: update 3.19.6 → 3.20.1 2023-11-07 19:56:43 -08:00
phonopy
plumed
pnetcdf
polytope
precice
psi4
pulseview
py-abipy
py-access
py-arbor
py-arch
py-asap3
py-asdf
py-asdf-standard
py-asdf-transform-schemas
py-asdf-unit-schemas
py-ase
py-atomium
py-avogadrolibs
py-boutdata
py-boututils
py-cdo
py-cfgrib
py-chainer
py-chainer-chemistry
py-chempy
py-cirq-aqt
py-cirq-core
py-cirq-google
py-cirq-ionq
py-cirq-pasqal
py-cirq-rigetti
py-coards
py-DendroPy
py-dftbplus
py-dftd4
py-dimod
py-dipy
py-dlib
py-dwave-cloud-client
py-dwave-greedy
py-dwave-hybrid
py-dwave-inspector
py-dwave-neal
py-dwave-networkx
py-dwave-ocean-sdk
py-dwave-preprocessing
py-dwave-samplers
py-dwave-system
py-dwave-tabu
py-dwavebinarycsp
py-earthpy
py-eccodes
py-emmet-core
py-esda
py-fresnel
py-gemmi
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5json
py-h5py
py-HepMC3
py-hiphive
py-hoomd-blue
py-inequality
py-ipygany
py-jupyter_jsmol
py-kim-query
py-kimpy
py-kinematics
py-kliff
py-kpLib
py-liac-arff
py-libgetar
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-meshio
py-mmcif
py-mmtf-python
py-molmod
py-moltemplate
py-mp-api
py-mpcontribs-client
py-mrchem
py-ncrystal science/py-ncrystal: Add missing dependency 2023-11-08 15:31:42 -08:00
py-netCDF4
py-netcdf-flattener
py-nglview
py-nibabel
py-nilearn
py-obspy
py-oddt
py-openbabel
py-OpenFermion
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC
py-openpiv
py-optking
py-paida
py-paramz
py-penaltymodel
py-phono3py
py-phonopy
py-PubChemPy
py-pupynere
py-py3Dmol
py-pyaixi
py-pyberny
py-pycsw
py-pydicom
py-PyFR
py-pygeodesy
py-pygeometa
py-pygmo2
py-pyked
py-pymatgen
py-pymatgen-analysis-alloys
py-pymbd
py-pymol
py-PyNE
py-pyosf
py-pyprecice
py-pyqubo
py-pysal
py-pyscf
py-pyteomics
py-qcelemental
py-qcengine
py-qiskit
py-qiskit-aer
py-qiskit-dynamics
py-qiskit-experiments
py-qiskit-finance
py-qiskit-ibm-experiment
py-qiskit-ibm-provider
py-qiskit-ibmq-provider
py-qiskit-nature
py-qiskit-optimization
py-qiskit-terra
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-sdf
py-segregation
py-segyio
py-signac
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti
py-spglib
py-tensorflow devel/icu: update to 74.1 2023-11-17 12:46:00 +01:00
py-thewalrus
py-tobler
py-trainstation
py-tweedledum
py-vedo
py-veusz
py-xbout
pybrain
pynn
q
qbox
qcl
qiskit-aer
qmcpack
qt6-quick3dphysics
quantum-espresso
quantum-espresso-pseudopotentials
quantum-jet
qwalk
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile
rubygem-ruby-netcdf
salome-configuration
salome-kernel
scidavis
sciplot
segyio
serac
shelxle
siconos
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simple-dftd3
simsmith
sirius
smoldyn
sparta
spglib
spheral science/spheral: Fix build by adding USES=localbase:ldflags 2023-11-15 02:36:04 -08:00
step KDE: Update KDE Gear to 23.08.3 2023-11-09 18:48:50 +01:00
svmlight
tblite
teem
tfel
tfel-edf
thermofun
tinker
trilinos
ttk
tweedledum
udunits
ukrmol+
v_sim
vipster
vmd
voro++
votca science/votca: update 2022.1 → 2023 2023-11-19 01:36:25 -08:00
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden
xdrawchem
xtb
yoda
zotero
zx
Makefile science/mcpl: New port: Monte Carlo Particle Lists library 2023-11-08 21:43:56 -08:00