Fernando Apesteguía ce0ee4f1b4 science/afni: update to 23.3.08 ... While here fix PKG_COMPRESSION_LEVEL		2023-11-19 19:02:12 +01:00
..
2d-rewriter
abinit
afni	science/afni: update to 23.3.08	2023-11-19 19:02:12 +01:00
agrum	science/agrum: update 1.9.0 → 1.10.0	2023-10-23 00:35:25 -07:00
aircraft-datcom
ALPSCore
antioch
apbs
arbor	science/{,py-}arbor: Update 0.8.1 → 0.9.0	2023-08-11 01:11:18 -07:00
ascent
atompaw
avogadro2
avogadrolibs	science/{,py-}spglib: update 2.0.2 → 2.1.0	2023-09-10 23:51:41 -07:00
axom
bagel	devel/boost*: bump all consumers after 1.83.0	2023-09-27 17:36:30 +03:00
bddsolve	science/bddsolve: fix build with boost 1.83.0	2023-10-01 11:39:18 +02:00
berkeleygw
bodr
bout++
bout++-merging-filaments
buddy	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-01 23:11:47 +01:00
cantera	science/cantera: Fix build on FreeBSD 12	2023-11-15 05:19:39 +08:00
cardioid
cdf
cdk
cdo	science/cdo: Update to 2.2.0	2023-09-04 17:04:32 +08:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemicalfun
chemps2
chemtool
chemtool-devel
chimes-calculator
ChipmunkPhysics
chrono
cif-tools
clhep	science/clhep: Update version 2.4.7.0=>2.4.7.1	2023-10-14 11:26:47 +02:00
clipper
code_saturne	science/PETSc: update 3.19.6 → 3.20.1	2023-11-07 19:56:43 -08:00
colt
conduit
coordgenlibs
cp2k
cp2k-data
csvtk	all: Bump PORTREVISION after lang/go* update	2023-09-08 09:34:56 -05:00
dakota	devel/icu: update to 74.1	2023-11-17 12:46:00 +01:00
dalton
dd_package
devisor
dftbplus
dftd3
dftd4
dimod	science/{,py-}dimod: Update 0.12.10 → 0.12.11	2023-08-17 23:57:49 -07:00
dirac	science/dirac: Fix build by adding USES=localbase:ldflags	2023-11-19 01:36:25 -08:00
dkh	science/dkh: drop not necessary CMAKE_ARGS	2023-08-12 03:37:42 +02:00
dlib-cpp
drawxtl
dssp
dvc
dwave-preprocessing
dynare	*/*: chase the upgrade of SuiteSparse	2023-10-15 11:03:17 +02:00
eccodes
elk	science/elk: update 8.8.26 → 9.2.5	2023-11-14 18:41:04 -08:00
elmerfem	science/elmerfem: Mark DEPRECATED	2023-10-26 20:17:05 +02:00
epte
erd	science/erd: drop not necessary anymore CMAKE_ARGS	2023-08-12 03:37:41 +02:00
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
feff10
fleur
frontistr
fsom
fvcom
fvcom-mpi
gabedit	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-06 11:03:47 +01:00
gamess-us
gbtolib
gchemutils
gcp
gdma
geant4	devel/onetbb: Update to 2021.10.0	2023-08-21 12:09:23 +02:00
gemmi	science/{,py-}gemmi: update 0.6.2 → 0.6.3	2023-09-10 11:10:46 -07:00
getdp
ghemical
ghmm	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-06 11:03:47 +01:00
gnudatalanguage	science/gnudatalanguage: upgrade GDL to v1.0.3	2023-09-10 18:29:49 +02:00
gpaw-setups
gramps
grib_api
gromacs	science/gromacs: Add comment	2023-11-03 19:27:59 -07:00
gsmc
gtamsanalyzer
h5utils
h5z-zfp	science/h5z-zfp: update 1.1.0 → 1.1.1	2023-09-01 01:26:25 -07:00
harminv
hdf
hdf5
hdf5-18
hdf5-110
healpix
helfem
hepmc3
highfive	science/highfive: update 2.7.1 → 2.8.0	2023-11-03 22:21:56 -07:00
hypre	science/hypre: update 2.29.0 → 2.30.0	2023-11-07 09:56:53 -08:00
iboview
InsightToolkit
InsightToolkit501
isaac-cfd	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-01 23:11:47 +01:00
jdftx
jmol
jstrack
kalzium	KDE: Update KDE Gear to 23.08.3	2023-11-09 18:48:50 +01:00
kim-api
kplib
kst2
lammps
lamprop
latte
libaec	science/libaec: Update to 1.1.2	2023-10-16 23:59:42 +08:00
libccp4
libcifpp
libcint	science/libcint: update 5.4.0 → 6.1.0	2023-11-12 02:24:00 -08:00
libctl
libecpint
libefp
libgeodecomp	science/libgeodecomp: Mark DEPRECATED	2023-10-29 23:53:32 +01:00
libgetar
libghemical
libgridxc
libint
libint2
libint2-psi4	science/libint2-psi4: Broken on aarch64	2023-08-16 22:27:08 -07:00
libkml	science/libkml: Fix linking with CMake >= 3.27	2023-11-08 00:36:35 -05:00
liblinear
libmbd
libmsym
libnegf
liboglappth
libquantum
libssm
libsvm
libsvm-python
libtensorflow1
libvdwxc
libxc
liggghts
linux-zotero
luscus
m-aneos
madness
maeparser	devel/boost*: bump all consumers after 1.83.0	2023-09-27 17:36:30 +03:00
massxpert
mbdyn	science/mbdyn: Remove Gotoblas	2023-10-28 12:08:45 -07:00
mcpl	science/mcpl: New port: Monte Carlo Particle Lists library	2023-11-08 21:43:56 -08:00
mcstas
mcstas-comps
mctc-lib
mcxtrace
mcxtrace-comps
mdynamix
medit
meep
mercantile	all: return bland@'s ports to the pool (+gnome) after safekeeping their commit bit.	2023-10-02 21:19:30 +02:00
metaphysicl
minc2
mmdb2
mmtf-cpp
mol2ps
molgif	all: Bump PORTREVISION after lang/go* update	2023-09-08 09:34:56 -05:00
molscript
molsketch
mopac
mp2d
mpb
mpqc
mrchem	science/{,py-}mrchem: update 1.1.2 → 1.1.3	2023-08-24 02:13:41 -07:00
mrcpp
msms
mstore
multicharge
multiwfn
mutationpp	science/mutationpp: New port: MUlticomponent Thermodynamic And Transport library for IONized gases	2023-11-05 22:33:14 -08:00
namd
ncrystal	science/ncrystal: New port: Library for thermal neutron transport in crystals and other materials	2023-11-07 19:56:42 -08:00
nest	science/nest: bump PORTREVISION	2023-08-12 03:37:41 +02:00
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nlcglib
nwchem
nwchem-data
ocean	science/ocean: update 3.0.5 → 3.1.0	2023-10-17 01:49:14 -07:00
octopus	science/octopus: update 11.4 → 13.0	2023-11-06 15:22:33 -08:00
openbabel	science/openbabel: Add perl build dependency	2023-11-04 09:57:02 -07:00
openems	science/openems: update 0.0.35-110 → 0.0.36	2023-10-23 20:10:14 -07:00
openkim-models
openmc
openmodelica	science/openmodelica: Mark DEPRECATED	2023-10-26 20:18:37 +02:00
openmolcas
openmx
opensim-core
opensph	devel/onetbb: Update to 2021.10.0	2023-08-21 12:09:23 +02:00
opsin
orthanc	devel/icu: update to 74.1	2023-11-17 12:46:00 +01:00
orthanc-dicomweb	devel/icu: update to 74.1	2023-11-17 12:46:00 +01:00
orthanc-mysql	devel/boost*: bump all consumers after 1.83.0	2023-09-27 17:36:30 +03:00
orthanc-postgresql	devel/boost*: bump all consumers after 1.83.0	2023-09-27 17:36:30 +03:00
orthanc-webviewer	devel/icu: update to 74.1	2023-11-17 12:46:00 +01:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2	devel/onetbb: Update to 2021.10.0	2023-08-21 12:09:23 +02:00
paje
paraview	devel/icu: update to 74.1	2023-11-17 12:46:00 +01:00
pastix	science/pastix: upgrade to v6.3.1	2023-11-17 19:04:20 +01:00
pcmsolver
PETSc	science/PETSc: update 3.19.6 → 3.20.1	2023-11-07 19:56:43 -08:00
phonopy	science/phonopy: drop not necessary GCC	2023-08-12 03:37:40 +02:00
plumed
pnetcdf
polytope
precice	devel/boost*: bump all consumers after 1.83.0	2023-09-27 17:36:30 +03:00
psi4	science/psi4: update 1.8.1 → 1.8.2	2023-10-07 11:41:19 -07:00
pulseview
py-abipy	science/py-abipy: update 0.9.4 → 0.9.6	2023-08-30 00:38:50 -07:00
py-access
py-arbor	science/{,py-}arbor: Update 0.8.1 → 0.9.0	2023-08-11 01:11:18 -07:00
py-arch
py-asap3
py-asdf	science/py-asdf: Update to 2.15.2	2023-10-01 07:30:07 +08:00
py-asdf-standard
py-asdf-transform-schemas	science/py-asdf-transform-schemas: Update to 0.4.0	2023-11-01 10:08:29 +08:00
py-asdf-unit-schemas
py-ase
py-atomium
py-avogadrolibs
py-boutdata
py-boututils
py-cdo
py-cfgrib
py-chainer
py-chainer-chemistry
py-chempy
py-cirq-aqt
py-cirq-core
py-cirq-google
py-cirq-ionq
py-cirq-pasqal
py-cirq-rigetti
py-coards
py-DendroPy
py-dftbplus
py-dftd4	science/py-dftd4: Broken	2023-08-15 00:53:10 -07:00
py-dimod	science/{,py-}dimod: Update 0.12.10 → 0.12.11	2023-08-17 23:57:49 -07:00
py-dipy
py-dlib
py-dwave-cloud-client
py-dwave-greedy
py-dwave-hybrid
py-dwave-inspector
py-dwave-neal
py-dwave-networkx
py-dwave-ocean-sdk
py-dwave-preprocessing
py-dwave-samplers
py-dwave-system
py-dwave-tabu
py-dwavebinarycsp
py-earthpy
py-eccodes	science/py-eccodes: Update to 1.6.1	2023-10-05 10:00:24 +08:00
py-emmet-core	science/py-emmet-core: Update 0.63.1 → 0.64.0	2023-08-08 22:52:30 -07:00
py-esda	science/py-esda: Update to 2.5.1	2023-11-01 10:08:29 +08:00
py-fresnel	devel/onetbb: Update to 2021.10.0	2023-08-21 12:09:23 +02:00
py-gemmi	science/{,py-}gemmi: update 0.6.2 → 0.6.3	2023-09-10 11:10:46 -07:00
py-geolinks	science/py-geolinks: Update to 0.2.3	2023-09-11 11:11:31 +08:00
py-geomet
py-geometer
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5json
py-h5py	science/py-h5py: Update to 3.10.0	2023-10-11 20:58:13 +08:00
py-HepMC3
py-hiphive	science/py-hiphive: Update 1.1 → 1.2	2023-08-14 09:48:49 -07:00
py-hoomd-blue	devel/onetbb: Update to 2021.10.0	2023-08-21 12:09:23 +02:00
py-inequality	science/py-inequality: Update to 1.0.1	2023-11-02 15:37:28 +08:00
py-ipygany
py-jupyter_jsmol
py-kim-query
py-kimpy
py-kinematics
py-kliff
py-kpLib
py-liac-arff
py-libgetar
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-06 11:03:47 +01:00
py-meshio
py-mmcif
py-mmtf-python
py-molmod
py-moltemplate
py-mp-api	science/py-mp-api: Update 0.33.3 → 0.34.0	2023-08-14 22:06:52 -07:00
py-mpcontribs-client
py-mrchem	science/{,py-}mrchem: update 1.1.2 → 1.1.3	2023-08-24 02:13:41 -07:00
py-ncrystal	science/py-ncrystal: Add missing dependency	2023-11-08 15:31:42 -08:00
py-netCDF4	science/py-netCDF4: Update version 1.6.4=>1.6.5	2023-10-26 14:22:06 +02:00
py-netcdf-flattener
py-nglview	science/py-nglview: update 3.0.6 → 3.0.7	2023-09-01 23:41:09 -07:00
py-nibabel
py-nilearn
py-obspy
py-oddt
py-openbabel	science/py-openbabel: Fix build with llvm16	2023-08-07 17:24:44 +02:00
py-OpenFermion	science/py-OpenFermion: update 1.5.1 → 1.6.0	2023-10-29 21:19:20 -07:00
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC
py-openpiv
py-optking
py-paida	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-01 23:11:47 +01:00
py-paramz
py-penaltymodel
py-phono3py
py-phonopy
py-PubChemPy
py-pupynere
py-py3Dmol
py-pyaixi
py-pyberny
py-pycsw
py-pydicom	science/py-pydicom: Update to 2.4.3	2023-08-17 12:57:15 +00:00
py-PyFR
py-pygeodesy
py-pygeometa	science/py-pygeometa: Update to 0.15.3	2023-09-22 11:19:09 +08:00
py-pygmo2
py-pyked
py-pymatgen
py-pymatgen-analysis-alloys
py-pymbd
py-pymol	Revert "science/py-pymol: Mark DEPRECATED"	2023-10-29 16:37:06 -04:00
py-PyNE	science/py-PyNE: Mark BROKEN on 14	2023-08-19 04:52:48 +02:00
py-pyosf
py-pyprecice	science/py-pyprecice: Update 2.5.0.2 → 2.5.0.4	2023-08-10 00:08:02 -07:00
py-pyqubo
py-pysal
py-pyscf	science/py-pyscf: update 2.3.0 → 2.4.0	2023-10-20 10:56:03 -07:00
py-pyteomics
py-qcelemental	science/py-qcelemental: update 0.26.0 → 0.27.0	2023-10-26 09:22:24 -07:00
py-qcengine	science/py-qcengine: Change comment	2023-08-07 18:15:57 -07:00
py-qiskit
py-qiskit-aer
py-qiskit-dynamics
py-qiskit-experiments
py-qiskit-finance
py-qiskit-ibm-experiment
py-qiskit-ibm-provider
py-qiskit-ibmq-provider
py-qiskit-nature
py-qiskit-optimization
py-qiskit-terra	lang/rust: Bump revisions after 1.73.0	2023-10-24 12:22:32 +02:00
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn	science/py-scikit-learn: Update to 1.3.2	2023-11-03 15:12:43 +00:00
py-scikit-optimize
py-scikit-sparse	*/*: bump portrevision to chase CHOLMOD’s upgrade	2023-10-31 15:07:33 +01:00
py-scimath
py-scipy
py-scoria
py-sdf
py-segregation
py-segyio
py-signac
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti
py-spglib	science/{,py-}spglib: update 2.0.2 → 2.1.0	2023-09-10 23:51:41 -07:00
py-tensorflow	devel/icu: update to 74.1	2023-11-17 12:46:00 +01:00
py-thewalrus
py-tobler
py-trainstation
py-tweedledum
py-vedo
py-veusz
py-xbout
pybrain
pynn	science/pynn: Update to 0.12.1	2023-10-03 12:50:30 +00:00
q
qbox
qcl
qiskit-aer
qmcpack
qt6-quick3dphysics	science/qt6-quick3dphysics: Add SIMD option	2023-10-28 13:31:00 -04:00
quantum-espresso
quantum-espresso-pseudopotentials
quantum-jet
qwalk
R-cran-bayesm	science/R-cran-bayesm: Update to 3.1.6	2023-09-28 09:21:18 +00:00
R-cran-cmprsk
R-cran-DCluster	science/R-cran-DCluster: Update to 0.2-9	2023-09-06 12:37:35 +00:00
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks	science/R-cran-ks: upgrade to 1.14.1	2023-08-19 22:20:58 +02:00
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit	science/rdkit: update 2023_03_3 → 2023_09_1	2023-10-15 15:06:36 -07:00
rmf	devel/boost*: bump all consumers after 1.83.0	2023-09-27 17:36:30 +03:00
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile	science/rubygem-rgeo-shapefile: Update to 3.1.0	2023-10-05 10:00:33 +08:00
rubygem-ruby-netcdf
salome-configuration
salome-kernel
scidavis	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-06 11:03:47 +01:00
sciplot
segyio
serac
shelxle	science/shelxle: update 1.0.1554 → 1.0.1556	2023-09-07 20:48:56 -07:00
siconos	*/*: chase the upgrade of SuiteSparse	2023-10-15 11:03:17 +02:00
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid	devel/boost*: bump all consumers after 1.83.0	2023-09-27 17:36:30 +03:00
simint
simlib
simple-dftd3
simsmith
sirius	science/{,py-}spglib: update 2.0.2 → 2.1.0	2023-09-10 23:51:41 -07:00
smoldyn	science/smoldyn: Update 2.71 → 2.72	2023-08-19 00:55:08 -07:00
sparta
spglib	science/{,py-}spglib: update 2.0.2 → 2.1.0	2023-09-10 23:51:41 -07:00
spheral	science/spheral: Fix build by adding USES=localbase:ldflags	2023-11-15 02:36:04 -08:00
step	KDE: Update KDE Gear to 23.08.3	2023-11-09 18:48:50 +01:00
svmlight
tblite
teem	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-06 11:03:47 +01:00
tfel
tfel-edf	*/*: Update WWW to use HTTPS for sourceforge.net projects	2023-11-06 11:03:47 +01:00
thermofun
tinker
trilinos	*/*: chase the upgrade of SuiteSparse	2023-10-15 11:03:17 +02:00
ttk
tweedledum
udunits
ukrmol+
v_sim
vipster
vmd
voro++
votca	science/votca: update 2022.1 → 2023	2023-11-19 01:36:25 -08:00
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden
xdrawchem
xtb
yoda
zotero
zx
Makefile	science/mcpl: New port: Monte Carlo Particle Lists library	2023-11-08 21:43:56 -08:00