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Merge branch 'bugfix'

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This commit is contained in:
Jack Kamm 2024-11-01 17:14:48 -07:00
commit 09e7bb0604
6 changed files with 64 additions and 8 deletions
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3
lisp/ob-R.el
View File

@ -492,7 +492,8 @@ by `org-babel-comint-async-filter'."
session (current-buffer)
"^\\(?:[>.+] \\)*\\[1\\] \"ob_comint_async_R_\\(start\\|end\\|file\\)_\\(.+\\)\"$"
'org-babel-chomp
'ob-session-async-R-value-callback)
'ob-session-async-R-value-callback
'disable-prompt-filtering)
(cl-case result-type
(value
(let ((tmp-file (org-babel-temp-file "R-")))

34
lisp/ob-comint.el
View File

@ -240,6 +240,9 @@ Its single argument is a string consisting of output from the
comint process. It should return a string that will be passed
to `org-babel-insert-result'.")
(defvar-local org-babel-comint-async-remove-prompts-p t
"Whether prompts should be detected and removed from async output.")
(defvar-local org-babel-comint-async-dangling nil
"Dangling piece of the last process output, as a string.
Used when `org-babel-comint-async-indicator' is spread across multiple
@ -327,10 +330,16 @@ STRING contains the output originally inserted into the comint buffer."
until (and (equal (match-string 1) "start")
(equal (match-string 2) uuid))
finally return (+ 1 (match-end 0)))))
;; Remove prompt
(res-promptless (org-trim (string-join (mapcar #'org-trim (org-babel-comint--prompt-filter res-str-raw)) "\n") "\n"))
;; Apply user callback
(res-str (funcall org-babel-comint-async-chunk-callback res-promptless)))
(res-str (funcall org-babel-comint-async-chunk-callback
(if org-babel-comint-async-remove-prompts-p
(org-trim (string-join
(mapcar #'org-trim
(org-babel-comint--prompt-filter
res-str-raw))
"\n")
t)
res-str-raw))))
;; Search for uuid in associated org-buffers to insert results
(cl-loop for buf in org-buffers
until (with-current-buffer buf
@ -351,18 +360,31 @@ STRING contains the output originally inserted into the comint buffer."
(defun org-babel-comint-async-register
(session-buffer org-buffer indicator-regexp
chunk-callback file-callback)
chunk-callback file-callback
&optional prompt-handling)
"Set local org-babel-comint-async variables in SESSION-BUFFER.
ORG-BUFFER is added to `org-babel-comint-async-buffers' if not
present. `org-babel-comint-async-indicator',
`org-babel-comint-async-chunk-callback', and
`org-babel-comint-async-file-callback' are set to
INDICATOR-REGEXP, CHUNK-CALLBACK, and FILE-CALLBACK
respectively."
INDICATOR-REGEXP, CHUNK-CALLBACK, and FILE-CALLBACK respectively.
PROMPT-HANDLING may be either of the symbols `filter-prompts', in
which case prompts matching `comint-prompt-regexp' are filtered
from output before it is passed to CHUNK-CALLBACK, or
`disable-prompt-filtering', in which case this behavior is
disabled. For backward-compatibility, the default value of `nil'
is equivalent to `filter-prompts'."
(org-babel-comint-in-buffer session-buffer
(setq org-babel-comint-async-indicator indicator-regexp
org-babel-comint-async-chunk-callback chunk-callback
org-babel-comint-async-file-callback file-callback)
(setq org-babel-comint-async-remove-prompts-p
(cond
((eq prompt-handling 'disable-prompt-filtering) nil)
((eq prompt-handling 'filter-prompts) t)
((eq prompt-handling nil) t)
(t (error (format "Unrecognized prompt handling behavior %s"
prompt-handling)))))
(unless (memq org-buffer org-babel-comint-async-buffers)
(setq org-babel-comint-async-buffers
(cons org-buffer org-babel-comint-async-buffers)))

3
lisp/ob-python.el
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@ -538,7 +538,8 @@ by `org-babel-comint-async-filter'."
(org-babel-comint-async-register
session (current-buffer)
"ob_comint_async_python_\\(start\\|end\\|file\\)_\\(.+\\)"
'org-babel-chomp 'org-babel-python-async-value-callback)
'org-babel-chomp 'org-babel-python-async-value-callback
'disable-prompt-filtering)
(pcase result-type
(`output
(let ((uuid (org-id-uuid)))

1
lisp/org-macs.el
View File

@ -33,6 +33,7 @@
(require 'cl-lib)
(require 'format-spec)
(eval-when-compile (require 'subr-x)) ; For `when-let*', Emacs < 29
;;; Org version verification.

3
lisp/org.el
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@ -8279,9 +8279,12 @@ See the docstring of `org-open-file' for details."
;; link abbreviations. So, suppressing parser complains about
;; non-Org buffer to keep the feature working at least to the extent
;; it did before.
(defvar warning-suppress-types) ; warnings.el
(let ((warning-suppress-types
(cons '(org-element org-element-parser)
warning-suppress-types)))
;; FIXME: Suppress warning in Emacs <30
;; (ignore warning-suppress-types)
(org-open-at-point)))
(defvar org-window-config-before-follow-link nil

28
testing/lisp/test-ob-R.el
View File

@ -316,6 +316,34 @@ x
(string= (concat text result)
(buffer-string)))))))
(ert-deftest test-ob-R/async-prompt-filter ()
"Test that async evaluation doesn't remove spurious prompts and leading indentation."
(let* (ess-ask-for-ess-directory
ess-history-file
org-confirm-babel-evaluate
(session-name "*R:test-ob-R/session-async-results*")
(kill-buffer-query-functions nil)
(start-time (current-time))
(wait-time (time-add start-time 3))
uuid-placeholder)
(org-test-with-temp-text
(concat "#+begin_src R :session " session-name " :async t :results output
table(c('ab','ab','c',NA,NA), useNA='always')
#+end_src")
(setq uuid-placeholder (org-trim (org-babel-execute-src-block)))
(catch 'too-long
(while (string-match uuid-placeholder (buffer-string))
(progn
(sleep-for 0.01)
(when (time-less-p wait-time (current-time))
(throw 'too-long (ert-fail "Took too long to get result from callback"))))))
(search-forward "#+results")
(beginning-of-line 2)
(when (should (re-search-forward "\
:\\([ ]+ab\\)[ ]+c[ ]+<NA>[ ]*
:\\([ ]+2\\)[ ]+1[ ]+2"))
(should (equal (length (match-string 1)) (length (match-string 2))))
(kill-buffer session-name)))))
(provide 'test-ob-R)