63 lines
1.2 KiB
Nix
63 lines
1.2 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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setuptools,
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cython,
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numpy,
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pbr,
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fastremap,
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pytestCheckHook,
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scipy,
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}:
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buildPythonPackage rec {
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pname = "connected-components-3d";
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version = "3.22.0";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "seung-lab";
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repo = "connected-components-3d";
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tag = version;
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hash = "sha256-txgQY9k96hFKLrKVLE6ldPdNbSnKOk2FIMrHkRQXlPk=";
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};
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build-system = [
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cython
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numpy
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pbr
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setuptools
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];
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dependencies = [ numpy ];
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optional-dependencies = {
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stack = [
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# crackle-codec # not in nixpkgs
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fastremap
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];
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};
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nativeCheckInputs = [
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pytestCheckHook
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scipy
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]
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++ optional-dependencies.stack;
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disabledTests = [
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# requires optional dependency crackle-codec (not in nixpkgs)
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"test_connected_components_stack"
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];
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pythonImportsCheck = [ "cc3d" ];
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meta = {
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description = "Connected components on discrete and continuous multilabel 3D & 2D images";
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homepage = "https://github.com/seung-lab/connected-components-3d";
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changelog = "https://github.com/seung-lab/connected-components-3d/releases/tag/${version}";
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license = lib.licenses.lgpl3Plus;
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maintainers = with lib.maintainers; [ bcdarwin ];
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};
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}
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