489f0ced17
Diff: https://github.com/common-workflow-language/cwl-utils/compare/refs/tags/v0.38...refs/tags/v0.39 Changelog: https://github.com/common-workflow-language/cwl-utils/releases/tag/v0.39
85 lines
1.7 KiB
Nix
85 lines
1.7 KiB
Nix
{
|
|
lib,
|
|
buildPythonPackage,
|
|
cwl-upgrader,
|
|
cwlformat,
|
|
fetchFromGitHub,
|
|
jsonschema,
|
|
packaging,
|
|
pytest-mock,
|
|
pytest-xdist,
|
|
pytestCheckHook,
|
|
pythonOlder,
|
|
rdflib,
|
|
requests,
|
|
ruamel-yaml,
|
|
schema-salad,
|
|
setuptools,
|
|
}:
|
|
|
|
buildPythonPackage rec {
|
|
pname = "cwl-utils";
|
|
version = "0.39";
|
|
pyproject = true;
|
|
|
|
disabled = pythonOlder "3.8";
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "common-workflow-language";
|
|
repo = "cwl-utils";
|
|
tag = "v${version}";
|
|
hash = "sha256-qmvFr+zUZxwFqC4mfdktcS4hrNhJnxvWmdSJSswJ874=";
|
|
};
|
|
|
|
build-system = [ setuptools ];
|
|
|
|
dependencies = [
|
|
cwl-upgrader
|
|
packaging
|
|
rdflib
|
|
requests
|
|
ruamel-yaml
|
|
schema-salad
|
|
];
|
|
|
|
nativeCheckInputs = [
|
|
cwlformat
|
|
jsonschema
|
|
pytest-mock
|
|
pytest-xdist
|
|
pytestCheckHook
|
|
];
|
|
|
|
pythonImportsCheck = [ "cwl_utils" ];
|
|
|
|
disabledTests = [
|
|
# Don't run tests which require Node.js
|
|
"test_context_multiple_regex"
|
|
"test_value_from_two_concatenated_expressions"
|
|
"test_graph_split"
|
|
"test_caches_js_processes"
|
|
"test_load_document_with_remote_uri"
|
|
# Don't run tests which require network access
|
|
"test_remote_packing"
|
|
"test_remote_packing_github_soft_links"
|
|
"test_cwl_inputs_to_jsonschema"
|
|
];
|
|
|
|
disabledTestPaths = [
|
|
# Tests require podman
|
|
"tests/test_docker_extract.py"
|
|
# Tests requires singularity
|
|
"tests/test_js_sandbox.py"
|
|
# Circular dependencies
|
|
"tests/test_graph_split.py"
|
|
];
|
|
|
|
meta = with lib; {
|
|
description = "Utilities for CWL";
|
|
homepage = "https://github.com/common-workflow-language/cwl-utils";
|
|
changelog = "https://github.com/common-workflow-language/cwl-utils/releases/tag/v${version}";
|
|
license = licenses.asl20;
|
|
maintainers = with maintainers; [ fab ];
|
|
};
|
|
}
|