83 lines
1.6 KiB
Nix
83 lines
1.6 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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# build-system
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setuptools,
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setuptools-scm,
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# dependencies
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dask,
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numpy,
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scipy,
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pandas,
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pims,
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# tests
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pyarrow,
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pytestCheckHook,
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scikit-image,
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}:
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buildPythonPackage rec {
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pname = "dask-image";
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version = "2024.5.3";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "dask";
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repo = "dask-image";
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tag = "v${version}";
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hash = "sha256-kXCAqJ2Zgo/2Khvo2YcK+n4oGM219GyQ2Hsq9re1Lac=";
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};
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postPatch = ''
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substituteInPlace dask_image/ndinterp/__init__.py \
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--replace-fail "out_bounds.ptp(axis=1)" "np.ptp(out_bounds, axis=1)"
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substituteInPlace tests/test_dask_image/test_imread/test_core.py \
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--replace-fail "fh.save(" "fh.write("
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'';
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build-system = [
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setuptools
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setuptools-scm
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];
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dependencies = [
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dask
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numpy
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scipy
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pandas
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pims
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];
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nativeCheckInputs = [
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pyarrow
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pytestCheckHook
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scikit-image
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];
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pythonImportsCheck = [ "dask_image" ];
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disabledTests = [
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# The following tests are from 'tests/test_dask_image/test_ndmeasure/test_find_objects.py' and
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# fail because of errors on numpy slices
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# AttributeError: 'str' object has no attribute 'start'
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"test_find_objects"
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"test_3d_find_objects"
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# AssertionError (comparing slices)
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"test_find_objects_with_empty_chunks"
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];
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meta = {
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description = "Distributed image processing";
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homepage = "https://github.com/dask/dask-image";
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changelog = "https://github.com/dask/dask-image/releases/tag/v${version}";
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license = lib.licenses.bsdOriginal;
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maintainers = with lib.maintainers; [ GaetanLepage ];
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};
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}
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