77 lines
1.4 KiB
Nix
77 lines
1.4 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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# build-system
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setuptools,
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# dependencies
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autograd,
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future,
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numba,
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numpy,
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pandas,
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patsy,
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scikit-learn,
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scipy,
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statsmodels,
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# tests
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matplotlib,
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pytest-xdist,
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pytestCheckHook,
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seaborn,
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}:
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buildPythonPackage rec {
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pname = "hyppo";
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version = "0.5.2";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "neurodata";
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repo = "hyppo";
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tag = "v${version}";
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hash = "sha256-7Y+UhneIGwqjsPCnGAQWF/l4r1gFbYs3fdHhV46ZBjA=";
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};
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# some of the doctests (4/21) are broken, e.g. unbound variables, nondeterministic with insufficient tolerance, etc.
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# (note upstream's .circleci/config.yml only tests test_*.py files despite their pytest.ini adding --doctest-modules)
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postPatch = ''
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substituteInPlace pytest.ini --replace-fail "addopts = --doctest-modules" ""
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'';
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build-system = [ setuptools ];
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dependencies = [
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autograd
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future
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numba
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numpy
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pandas
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patsy
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scikit-learn
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scipy
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statsmodels
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];
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nativeCheckInputs = [
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pytest-xdist
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pytestCheckHook
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matplotlib
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seaborn
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];
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enabledTestPaths = [
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"hyppo"
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];
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meta = {
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homepage = "https://github.com/neurodata/hyppo";
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description = "Python package for multivariate hypothesis testing";
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changelog = "https://github.com/neurodata/hyppo/releases/tag/v${version}";
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license = lib.licenses.mit;
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maintainers = with lib.maintainers; [ bcdarwin ];
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};
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}
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