81 lines
1.5 KiB
Nix
81 lines
1.5 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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pythonOlder,
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ninja,
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numpy,
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packaging,
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pybind11,
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torch,
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which,
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}:
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buildPythonPackage rec {
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pname = "monai";
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version = "1.5.0";
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pyproject = true;
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disabled = pythonOlder "3.9";
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src = fetchFromGitHub {
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owner = "Project-MONAI";
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repo = "MONAI";
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tag = version;
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hash = "sha256-SUZSWChO0oQlLblPwmCg2zt2Jp5QnpM1CXWnMiOiLhw=";
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# note: upstream consistently seems to modify the tag shortly after release,
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# so best to wait a few days before updating
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};
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postPatch = ''
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substituteInPlace pyproject.toml --replace-fail 'torch>=2.4.1, <2.7.0' 'torch'
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'';
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preBuild = ''
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export MAX_JOBS=$NIX_BUILD_CORES;
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'';
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build-system = [
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ninja
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which
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];
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buildInputs = [ pybind11 ];
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dependencies = [
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numpy
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packaging
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torch
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];
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pythonRelaxDeps = [ "torch" ];
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env.BUILD_MONAI = 1;
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doCheck = false; # takes too long; tries to download data
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pythonImportsCheck = [
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"monai"
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"monai.apps"
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"monai.data"
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"monai.engines"
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"monai.handlers"
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"monai.inferers"
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"monai.losses"
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"monai.metrics"
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"monai.optimizers"
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"monai.networks"
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"monai.transforms"
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"monai.utils"
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"monai.visualize"
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];
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meta = with lib; {
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description = "Pytorch framework (based on Ignite) for deep learning in medical imaging";
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homepage = "https://github.com/Project-MONAI/MONAI";
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changelog = "https://github.com/Project-MONAI/MONAI/releases/tag/${version}";
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license = licenses.asl20;
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maintainers = [ maintainers.bcdarwin ];
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};
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}
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