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3654 Commits

Author SHA1 Message Date
Tobias C. Berner
d5f25d5b15 New port: science/step, science/kalzium 
This is the current version of KDE Applications <foo>.
Note that users of KDE SC4 should stick with <foo>-kde4.
 2018-04-09 18:32:24 +00:00
Thierry Thomas
75f8896e5f Upgrade to 0.9.8. 
Changelog at https://sourceforge.net/projects/gnudatalanguage/files/gdl/0.9.8/
 2018-04-07 20:06:19 +00:00
Max Brazhnikov
09b7c14b30 Add explicit dependence on Qt components 2018-04-07 18:49:01 +00:00
Max Brazhnikov
53195b0b38 science/kst2: 
- Switch to GITHUB and update to 2018.04.05 snapshot
- Remove stale patch
- Build Qt 5 version by default
- Take maintainership
 2018-04-07 16:40:01 +00:00
Sunpoet Po-Chuan Hsieh
70b56fdc2c Add rubygem-rgeo-shapefile 1.0.0 
RGeo::Shapefile is an optional module for RGeo for reading geospatial data from
ESRI shapefiles.

WWW: https://github.com/rgeo/rgeo-shapefile
 2018-04-07 16:33:40 +00:00
Sunpoet Po-Chuan Hsieh
8019a81868 Add rubygem-rgeo-proj4 1.0.0 
RGeo::Proj4 contains proj.4 extensions to the RGeo gem.

WWW: https://github.com/rgeo/rgeo-proj4
 2018-04-07 16:33:14 +00:00
Sunpoet Po-Chuan Hsieh
f0e475bd6f Add rubygem-rgeo-geojson 2.0.0 
RGeo::GeoJSON is an extension to the RGeo gem that provides GeoJSON encoding and
decoding.

WWW: https://github.com/rgeo/rgeo-geojson
 2018-04-07 16:32:45 +00:00
Sunpoet Po-Chuan Hsieh
bb0fe16f32 Add rubygem-rgeo 1.0.0 
RGeo is a geospatial data library for Ruby.

RGeo is a key component for writing location-aware applications in the Ruby
programming language. At its core is an implementation of the industry standard
OGC Simple Features Specification, which provides data representations of
geometric objects such as points, lines, and polygons, along with a set of
geometric analysis operations. This makes it ideal for modeling geolocation
data. It also supports a suite of optional add-on modules that provide various
geolocation-related services.

Use the core rgeo gem to:
- Represent spatial and geolocation data objects such as points, lines, and
  polygons in your Ruby application.
- Perform standard spatial analysis operations such as finding intersections,
  creating buffers, and computing lengths and areas.
- Correctly handle spherical geometry, and compute geographic projections for
  map display and data analysis.
- Read and write location data in the WKT and WKB representations used by
  spatial databases.

WWW: https://github.com/rgeo/rgeo
 2018-04-07 16:32:18 +00:00
Yuri Victorovich
2152f46a5e science/psychopy: Update 1.90.0 -> 1.90.1 
Reported by:	portscout
 2018-04-06 08:14:03 +00:00
Jose Alonso Cardenas Marquez
5ab881a5d9 - Migrate Mk/bsd.fpc.mk to Mk/Uses/fpc.mk 
- Convert all fpc-based ports to USES=fpc

PR:             227210
Reviewed by:    portmgr
Approved by:    portmgr
Exp-run by:     antoine
Differential Revision:  https://reviews.freebsd.org/D14617
 2018-04-05 04:52:36 +00:00
Sunpoet Po-Chuan Hsieh
035b6d661a Update to 1.3.6 
Changes:	https://github.com/Try2Code/cdo-bindings/blob/master/README.md#changelog
		https://github.com/Try2Code/cdo-bindings/commits/master
 2018-04-04 18:53:54 +00:00
Sunpoet Po-Chuan Hsieh
c84f0406ef Update to 1.3.6 
- Update WWW

Changes:	https://github.com/Try2Code/cdo-bindings/blob/master/README.md#changelog
		https://github.com/Try2Code/cdo-bindings/commits/master
 2018-04-04 18:53:03 +00:00
TAKATSU Tomonari
9076ac9e3f - Update to 2.26 2018-04-02 09:54:34 +00:00
Max Brazhnikov
53f46b075b Add new port science/py-openpiv: 
Python module for Particle Image Velocimetry (PIV) image analysis
and post-processing.

WWW: http://www.openpiv.net/
 2018-04-02 08:43:54 +00:00
Dmitry Marakasov
f24869983a - Update WWW 
Approved by:	portmgr blanket
 2018-03-31 09:33:26 +00:00
Yuri Victorovich
4ad7614bad science/py-OpenFermion: Update 0.4-29 -> 0.6 
Reported by:	portscout
 2018-03-30 23:18:19 +00:00
Yuri Victorovich
2ba5005caa New port: science/py-quantities: Support for physical quantities with units, based on numpy 2018-03-29 20:37:39 +00:00
Yuri Victorovich
6fc3426c8c science/rdkit: Add python binding 2018-03-29 06:35:58 +00:00
Mark Linimon
68d1496cc3 Mark unbroken on aarch64. I had some stale information in one of my 
reference files.

Reported by:	Adriaan de Groot
 2018-03-29 04:42:45 +00:00
Yuri Victorovich
89e7355c19 New port: science/libcint: General GTO integrals for quantum chemistry 2018-03-26 23:13:45 +00:00
Yuri Victorovich
ef4e5a2e59 science/py-OpenFermion: Fix py27 build 
It now needs 'future' for build.
 2018-03-26 21:48:27 +00:00
Yuri Victorovich
6525e4f13d science/py-OpenFermion: Update 0.4 -> 0.4-29; Remove workaround 
The upstream fixed the bug with non-ascii characters.
 2018-03-26 21:25:10 +00:00
Antoine Brodin
61c4834693 Unbreak 
Reported by:	pkg-fallout
Pointy hat:	yuri
 2018-03-26 19:34:27 +00:00
Baptiste Daroussin
3147bb6c6b Make libgnome and libgnomeui not implying esound dependency 
It has been a while both does not depend anymore on esound, before this change
esound dependency was wrongly added to plenty of packages which actually does
not depend on it.

While here:

- audio/glame: remove esound support
- games/monkeybubble: add an explicit dependency on esound
- sysutils/gnome-schedule: add en explicit dependency on pkg-config
- comms/kb: add missing dependency on pkgconfig
- x11-toolkits/libgnomeui:
  * update to 2.4.5
  * use USES=localbase
 2018-03-26 12:38:56 +00:00
Yuri Victorovich
80bace4a52 science/PETSc: Update 3.8.3 -> 3.8.4 
Reported by:	portscout
 2018-03-26 10:11:16 +00:00
Yuri Victorovich
df2013481a science/chemps2: Update 1.8.6 -> 1.8.7 
Reported by:	portscout
 2018-03-26 09:47:56 +00:00
Yuri Victorovich
f28f234b25 New port: science/py-OpenFermion: Electronic structure package for quantum computers 2018-03-26 09:39:42 +00:00
Yuri Victorovich
2c432ea8ff science/siril: Move to astro/siril; Mark broken on i386; Add OPENMP category 2018-03-26 09:04:18 +00:00
Sunpoet Po-Chuan Hsieh
af0dc38cef Update to 0.108 
Changes:	http://search.cpan.org/dist/Geo-WebService-Elevation-USGS/Changes
 2018-03-25 18:06:28 +00:00
Yuri Victorovich
b5ee0e59e2 science/psychopy: Update 1.85.6 -> 1.90.0 
Port changes:
* Change to DISTVERSION
* Add LICENSE_FILE
* Add missing dependencies to RUN_DEPENDS
* Group USExx section
 2018-03-24 06:43:39 +00:00
Yuri Victorovich
fcedcd5e27 New port: science/py-pyosf: Python lib for synching with OpenScienceFramework projects 2018-03-24 06:38:46 +00:00
Yuri Victorovich
6b5ade3581 science/chemtool: Update 1.6.11 -> 1.6.14 
Port changes:
* Take maintainership
* Change to DISTVERSION
* Add LICENSE/LICENSE_FILE
* Add missing dependencies in LIB_DEPENDS and USE_GNOME
* Add the NLS option
* Add PORTEXAMPLES=*
* Remove post-patch (not needed)
* Remove do-install (not needed, except for EXAMPLES)
 2018-03-24 01:06:20 +00:00
Dmitry Marakasov
3e49880ca3 - Add missing depend on libX11 
- Switch to new test framework

Approved by:	portmgr blanket
 2018-03-22 08:33:19 +00:00
Yuri Victorovich
a067889d03 New port: science/rdkit: Collection of cheminformatics and machine-learning software 2018-03-22 08:23:57 +00:00
Yuri Victorovich
5a2a5d32b9 science/py-pymol: Add GUI options QT5 and TK; Add missing dependency NUMPY 
Now QT5 is the default, while Tk is still available as a second choice.
 2018-03-22 05:48:25 +00:00
Yuri Victorovich
f138c0cebf science/h5utils: Update to 1.13.1 
Port changes:
* Change to DISTVERSION
* Add USES=compiler:c++11-lang and CXXFLAGS+=-std=c++11
* Remove duplicate GNU_CONFIGURE and unnecessary +=
* Add the option OCTAVE for Octave integration

PR:		226815
Submitted by:	Klaus Aehlig <aehlig@linta.de> (maintainer) - sumbitted w/out the OCTAVE option
 2018-03-22 04:45:38 +00:00
Yuri Victorovich
ed32f634e1 science/py-pymol: Update to 2.1.0 
Release notes:
https://pymol.org/dokuwiki/?id=media:new21

Port changes:
* Fixed shebang in bin/pymol
* Misc minor changes

Reported by:	portscout
 2018-03-20 07:53:14 +00:00
Mark Linimon
3dc1057e77 Mark as broken on arm. 
Approved by:	portmgr (tier-2 blanket)
 2018-03-18 06:22:04 +00:00
Yuri Victorovich
b22ecee081 science/meep: Add license; Add missing dependencies; Order USExx section 
Approved by:	Approved by:    portmgr blanket
 2018-03-18 06:01:25 +00:00
Yuri Victorovich
352e9db545 science/chemps2: Update to 1.8.6 
Also add USE_LDCONFIG=yes

Reported by:	portscout
 2018-03-17 17:15:22 +00:00
Danilo G. Baio
5415855f92 Fix order of variables 
Ports maintained by me in categories: science security sysutils textproc
 2018-03-17 14:43:34 +00:00
Sunpoet Po-Chuan Hsieh
8b85cd4e6a Update to 4.6.1 
- Update MASTER_SITES

Changes:	https://github.com/Unidata/netcdf-c/releases
		https://github.com/Unidata/netcdf-c/blob/master/RELEASE_NOTES.md
 2018-03-16 15:20:30 +00:00
Sunpoet Po-Chuan Hsieh
c1b678aad4 Convert to USE_GITLAB 2018-03-14 18:11:33 +00:00
Yuri Victorovich
1c88bd54df science/ncs: Unbreak 
Port changes:
* Fixed shebang in bin/code_saturne
* Added stripping
* Added missing LIB_DEPENDS

Approved by:	portmgr (port compliance, infrastructure)
 2018-03-13 09:50:42 +00:00
Yuri Victorovich
6ce624df42 science/lamprop: Unbreak by fixing the python interpreter in the shebang 
While here, added NO_ARCH.

Approved by:	portmgr (port compliance, infrastructure)
 2018-03-13 08:27:23 +00:00
Rene Ladan
80acf24533 Return maho@'s ports to the pool after his commit bit expired. 
With hat:	portmgr
 2018-03-11 11:20:43 +00:00
Wen Heping
1052d22ee6 - Update to 1.0.2 
- Update WWW
 2018-03-11 01:22:55 +00:00
Gerald Pfeifer
c2a92a1aea Bump PORTREVISIONs of all users of math/mpc that we just updated to 
version 1.1.0 (via revision 464079).
 2018-03-10 17:46:04 +00:00
Mark Linimon
5f1ce9ee4f Add more information to stub error messages. 
Remove BROKEN lines where IGNORE has already been set.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)
 2018-03-09 22:46:22 +00:00
Thierry Thomas
4a4aa3b0ec Update science/tfel to 3.1.1 and turn on python option by default. 
PR:		223952
Submitted by:	pfg (maintainer)
 2018-03-09 21:55:37 +00:00