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Commit Graph

18 Commits

Author SHA1 Message Date
Dmitry Marakasov
a70208be74 Fix build on mips by properly respecting compiler and flags 2015-08-05 12:18:41 +00:00
Baptiste Daroussin
99a3e8559c Cleanup plist 2014-10-20 07:10:48 +00:00
John Marino
4fa4056388 biology/mummer: Use OPSYS with OSVERSION
I don't think selecting clang as a function of OSVERSION is generally
desired, but if it's going to happen, make sure FreeBSD-specific
conditions are limited to FreeBSD by comparing OPSYS first.
2014-07-19 22:00:16 +00:00
Martin Wilke
2a912e1c5e Fix compilation on 10+ (clang)
Fix format of WWW entry in pkg-descr

PR:		190798
2014-06-27 14:14:01 +00:00
John Marino
d0bb05930a Reset the 99 ports still listed under sylvio@
Sylvio's last commit was 17 months ago, a full 5 months after all of his
ports could have been reset per policy.  Given the push to complete
staging (48 ports are still unstaged, something like 70+ have already
been staged by other committers) and given that PRs are automatically
assigned but never addressed, it's better just to reset all the ports and
PRs so that it's clear to others that these ports are free to maintain.

Approved by:	portmgr (implicit)
2014-06-11 18:55:29 +00:00
Jimmy Olgeni
37e782dfbc Remove indefinite articles and trailing periods from COMMENT, plus
minor COMMENT typos and surrounding whitespace fixes. Categories A-C.

CR:		D196
Approved by:	portmgr (bapt)
2014-06-09 11:21:52 +00:00
Olli Hauer
c3fa596129 - add stage support 2014-06-01 10:54:33 +00:00
Martin Wilke
059bf913b9 - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
Emanuel Haupt
094043c26a Remove trailing whitespaces from category biology 2014-02-21 13:35:26 +00:00
Emanuel Haupt
5005b67362 According to the Porter's Handbook (5.12.2.3.) default options must be added to
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.

This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.

Approved by:    portmgr (bapt)
2014-02-10 13:54:26 +00:00
Adam Weinberger
955d37365b Convert biology to MDOCS and MEXAMPLES 2014-01-03 15:46:52 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Sylvio Cesar Teixeira
aad73e57ae - Update to 3.23 2012-01-17 00:51:39 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Sylvio Cesar Teixeira
f1cd5913ef - Update to 3.22
Approved by: 	itetcu (mentor)
2010-03-21 17:18:20 +00:00
Sylvio Cesar Teixeira
ba072d1713 - Update my mail address to FreeBSD
Approved by:	miwi (mentor)
2009-11-27 22:52:30 +00:00
Marcelo Araujo
7c7ff787ef - Update to 3.21.
- Reset maintainer to submitter.

PR:		ports/138192
Submitted by:	Sylvio Cesar <scjamorim@bsd.com.br>
2009-08-28 14:52:05 +00:00
Martin Wilke
9326ebd9c8 MUMmer is a modular system for the rapid whole genome alignment of finished
or draft sequence. This package provides an efficient suffix tree library,
seed-and-extend alignment, SNP detection, repeat detection, and
visualization tools.

WWW:	http://mummer.sourceforge.net/

PR:		ports/118142
Submitted by:	Tony Maher
2007-12-14 20:54:47 +00:00