10 Commits

Author	SHA1	Message	Date
Olli Hauer	684d78ae77	- add stage support	2014-06-01 11:33:57 +00:00
Martin Wilke	059bf913b9	- Convert USE_GMAKE to USES	2014-03-13 07:41:34 +00:00
Emanuel Haupt	094043c26a	Remove trailing whitespaces from category biology	2014-02-21 13:35:26 +00:00
Emanuel Haupt	5005b67362	According to the Porter's Handbook (5.12.2.3.) default options must be added to ... OPTIONS_DEFINE. This policy has been implemented only recently that's why we have many ports violating this policy. This patch adds the default options specified in the Porter's Handbook to OPTIONS_DEFINE where they are being used. Ports maintained by gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded. Approved by: portmgr (bapt)	2014-02-10 13:54:26 +00:00
Adam Weinberger	955d37365b	Convert biology to MDOCS and MEXAMPLES	2014-01-03 15:46:52 +00:00
Baptiste Daroussin	7055ff02f1	Add NO_STAGE all over the place in preparation for the staging support (cat: biology)	2013-09-20 15:55:44 +00:00
Andrej Zverev	6f12870030	- convert to the new perl5 framework ... Approved by: portmgr (bapt@, blanket)	2013-09-07 07:44:26 +00:00
Julien Laffaye	1ca81797c4	Update to 1.1.04 ... PR: ports/157527 Submitted by: Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp> Approved by: bapt (mentor)	2011-06-09 16:33:21 +00:00
Martin Wilke	a9481afc8a	- Get Rid MD5 support	2011-03-19 12:38:54 +00:00
Dmitry Marakasov	8dbd1070da	Velvet is a de novo genomic assembler specially designed for short read ... sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI). Citation: Velvet: algorithms for de novo short read assembly using de Bruijn graphs. D.R. Zerbino and E. Birney. Genome Research 18: 821-829 (2008) WWW: http://www.ebi.ac.uk/~zerbino/velvet/ PR: 140147 Submitted by: Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp>	2009-11-07 01:23:59 +00:00