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666 Commits

Author SHA1 Message Date
Thierry Thomas
ad720f7433 Upgrade to 0.5 and take maintainership. 
Remark: still broken on FreeBSD-5.x.

PR:		ports/79304
Submitted by:	Fernan Aguero (new maintainer)
Approved by:	Tony Maher (previous maintainer)
 2005-04-08 22:45:42 +00:00
Kris Kennaway
8f10413ffa Try to unbreak on amd64 and ia64 
Approved by:    portmgr (self)
 2005-03-26 22:20:19 +00:00
Kris Kennaway
03f424f513 BROKEN: Unfetchable 
Approved by:    portmgr (self)
 2005-03-26 21:59:50 +00:00
Maho Nakata
3b43fb872d Fix build on amd64 
Submitted by:	kris via pointy hat
Approved by:	portmgr (marcus)
 2005-03-24 01:06:40 +00:00
Herve Quiroz
2ed22f8f65 - Add 'java' category 
- Remove incorrect (and unneeded) JAVA_RUN statement

PR:		78761
Submitted by:	me
 2005-03-20 14:43:55 +00:00
Pav Lucistnik
320a3ff48e - Fix man page damage I did last night 
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
 2005-03-20 11:47:59 +00:00
Pav Lucistnik
807384d668 - Update to 2.2.10 from 20041020 
- Transfer maintainership

PR:		ports/67735
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
Approved by:	old maintainer indirectly in
http://lists.freebsd.org/pipermail/freebsd-ports-bugs/2004-June/035351.html
 2005-03-19 21:32:13 +00:00
Alexey Dokuchaev
44ff373a2a From the PR: 
I've added PORTREVISION to the port and set it to the release
  date as in the lang/gcc* ports.  Since the distinfo file is not
  used, this would help users know when they have to update their
  ports.

  Although newer release might be made, the idea is to bump
  PORTREVISION for important feature releases on when significant
  bugs are fixed.

  Other minor (cosmetic) changes also applied.

PR:		ports/78963
Sumbitted by:	maintainer
 2005-03-18 13:01:07 +00:00
Joe Marcus Clarke
b3458f652e Bump PORTREVISION to chase the glib20 shared lib version change. 2005-03-12 10:54:27 +00:00
Sergey Matveychuk
5282793c25 - biology/act is redundant after biology/artemis update 
PR:             ports/76217
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar>
Approved by:	maintainer timeout (2 monthes)
 2005-03-12 08:07:23 +00:00
Sergey Matveychuk
0dc38c05ba - Update to version 6 
- Pass maintainership to submitter

PR:		ports/76219
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar>
Approved by:	maintainer timeout (2 monthes)
 2005-03-12 08:01:19 +00:00
Thierry Thomas
142b74833b Add finchtv 1.3.0, a chromatogram trace viewer. 
PR:		70271
Submitted by:	Fernan Aguero <fernan (at) iib.unsam.edu.ar>
 2005-03-11 21:16:16 +00:00
Kirill Ponomarev
4b76311e47 Fix build on 4.x 
PR:		ports/77697
Submitted by:	Sam Lawrance <boris at brooknet.com.au>
 2005-02-19 06:38:25 +00:00
Kris Kennaway
11ea174ccb As previously announced, remove ports that have reached their expiry date, 
and the handful of ports that depended on them.
 2005-02-18 23:44:49 +00:00
Kirill Ponomarev
413ef4bf43 Update to version 2.0.3 
PR:		ports/77676
Submitted by:	Sam Lawrance <boris at brooknet.com.au>
 2005-02-18 13:45:42 +00:00
Kirill Ponomarev
10571886d6 Readd mistakenly removed patch to honour CC/CFLAGS. 2005-02-18 13:41:09 +00:00
Kirill Ponomarev
a8944ffbf8 Update to version 1.40 
PR:		ports/77675
Submitted by:	Sam Lawrance <boris at brooknet.com.au>
 2005-02-18 13:39:34 +00:00
Kirill Ponomarev
0b4743610c Fix unfetchable tarball, it was renamed and relocated on original 
server.

PR:		ports/77674
Submitted by:	Sam Lawrance <boris at brooknet.com.au>
 2005-02-18 12:58:07 +00:00
Sergey Matveychuk
73d0a2892a - Add (or fix) CONFLICTS line. The ports install bin/digest. 
Approved by:	portmgr (krion)
 2005-02-11 21:11:51 +00:00
Maho Nakata
d8a8a937f0 update to 0.97 2005-02-07 08:39:51 +00:00
Mark Linimon
d4bb9bdf92 With portmgr hat on, reset maintainership of this port. All of wjv's 
other ports were reset a couple of months ago; this one appears to have
been missed.
 2005-01-22 04:43:18 +00:00
Maho Nakata
a8fdc546a8 o update to 4.3 
o unbreak
o due to no fix for long period, drop maintainership to ports.
 2005-01-20 03:44:55 +00:00
Akinori MUSHA
ad31ad2bd2 Update to 0.6.2. 2004-12-25 17:52:46 +00:00
Kris Kennaway
b70e8b7e1d This port is scheduled to be removed on 2005-02-18 if it is still 
broken at that time, and a fix has not been submitted to GNATS.
 2004-12-18 23:02:35 +00:00
Kirill Ponomarev
f4bbeec3cb Update to version 2.0.8 
PR:		ports/75106
Submitted by:	Ports Fury
 2004-12-18 18:48:13 +00:00
Sergey Matveychuk
88de31623a - Update to 2004.12.16 
PR:		ports/75205
Submitted by:	maintainer
 2004-12-18 15:14:42 +00:00
Mark Linimon
4aa015434f Clean up wording of IGNORE output. 2004-12-17 08:01:21 +00:00
Mark Linimon
600b5645fd Unquote the IGNORE string. 2004-12-17 07:43:11 +00:00
Mark Linimon
020f0ea235 With portmgr hat on, switch from BROKEN to ignore. It does indeed build. 2004-12-17 06:43:46 +00:00
Pav Lucistnik
b5e176497d - Fix OPTIONS handling 
Pointy hat to:	sem
 2004-12-11 23:32:32 +00:00
Sergey Matveychuk
5e2edc3f15 Not a real update with the last patch. 
The real update here.
 2004-12-11 03:58:19 +00:00
Sergey Matveychuk
fd116809ac - This update brings seaview to the latest release (dated 09.24.04 
in the FTP site).

- While here add a modeline for vi, and fix a tab (cosmetic)

- Make portlint happy.

PR:		ports/74897
Submitted by:	maintainer
 2004-12-11 03:49:29 +00:00
Pav Lucistnik
487872e2c3 - Add some sites I found with Google, as old master site don't have this 
version anymore

Reported by:	pointyhat via krion
 2004-12-09 13:33:55 +00:00
Kris Kennaway
0a01282986 BROKEN: Broken distinfo file 2004-12-04 01:45:38 +00:00
Hye-Shik Chang
5a37bd265f Fix build on Python 2.4 
Spotted by:	kris
 2004-12-02 05:51:25 +00:00
Kirill Ponomarev
39a1da7133 Update MASTER_SITES and WWW: line 
PR:		ports/74421
Submitted by:	Ports Fury
 2004-11-26 19:45:59 +00:00
Sergey Matveychuk
883e920692 [new port] biology/embassy 
PR:		ports/74330
Submitted by:	Fernan Aguero <fernan(at)iib.unsam.edu.ar>
 2004-11-26 16:34:22 +00:00
Sergey Matveychuk
626e4b86a8 - Update to 2.9.0 
- Pass maintainership to submitter

PR:             ports/74333
Submitted by:   Fernan Aguero <fernan(at)iib.unsam.edu.ar>
 2004-11-26 01:11:43 +00:00
Kris Kennaway
2a30ca0747 Add missing files 2004-11-26 00:25:40 +00:00
Sergey Matveychuk
d667344504 - Update to 2.03 
- Pass maintainership to submitter

PR:		ports/74332
Submitted by:	Fernan Aguero <fernan(at)iib.unsam.edu.ar>
 2004-11-25 23:03:54 +00:00
Sergey Matveychuk
5275953004 - Remove a junk white space. 2004-11-25 22:58:29 +00:00
Sergey Matveychuk
3b19501744 - Update to 2.3.2 
- Add WITH_PVM knob
- Pass maintainership to submitter

PR:		ports/74331
Submitted by:	Fernan Aguero <fernan(at)iib.unsam.edu.ar>
 2004-11-25 22:35:52 +00:00
Mark Linimon
ec815d2dd0 Minor cleanup. 
PR:		ports/72094
Submitted by:	M. L. Dodson <bdodson at scms dot utmb dot edu>  (maintainer)
 2004-11-23 09:13:14 +00:00
Volker Stolz
ab55250fa2 - Update biology/biojava to 1.30 
- Install javadoc and example files
- Assign maintainership to submitter

PR:		ports/73391
Submitted by:	Cheng-Dae Choe
Add. reviewing:	hq@
 2004-11-22 15:47:58 +00:00
Mark Linimon
e22ed3d655 With portmgr hat on, reset inactive maintainer. These ports are now up 
for adoption.
 2004-11-20 08:09:49 +00:00
Mark Linimon
9f305c48e4 With portmgr hat on, reset inactive maintainer. 2004-11-20 07:40:43 +00:00
Pav Lucistnik
775ed95279 - Distfiles change every few days, so drop md5 checking on them 
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
 2004-11-18 07:58:41 +00:00
Pav Lucistnik
cfaac59499 Add blast, a powerful software package for gene and protein identification, 
using sensitive, selective and rapid similarity searches of protein and
nucleotide sequence databases.

PR:		ports/69636
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar>
 2004-11-11 21:35:04 +00:00
Joe Marcus Clarke
46a4d69571 Bump PORTREVISIONS for all ports that depend on atk or pango to ease in the 
big upgrade.
 2004-11-07 22:37:47 +00:00
Pav Lucistnik
6743d66769 - Fix build on amd64 (crude hack to pass -fPIC to c++ compiles) 
Reported by:	pointyhat via kris
Tested on:	arved's box
 2004-11-06 23:12:14 +00:00