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1314 Commits

Author SHA1 Message Date
Steve Wills
03809fed45 - Update to 2.11 
Changes:	http://cpansearch.perl.org/dist/Bio-Das-Lite/Changes
 2011-05-08 17:06:15 +00:00
Max Brazhnikov
630ca2285f Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
Max Brazhnikov
642c8ce78f Fix build with open-motif-2.3.3 
PR:		ports/154044
Submitted by:	Mikhail Tsatsenko <m.tsatsenko at gmail.com>
Exp-runs by:	pav
 2011-05-02 12:41:44 +00:00
Greg Larkin
7a3687325a - Updated WWW: to a working link 
- Copied unbranded distfile (dotter.LIN) to LOCAL/glarkin for mirroring to
  MASTER_SITE_LOCAL and prevention of fetch checksum error. [1]

Reported by:	pointyhat (via miwi)
 2011-04-22 18:59:11 +00:00
Wen Heping
ac92b12813 Bio::GFF3 are low-level, fast functions for parsing GFF version 3 files. 
All they do is convert back and forth between low-level Perl data
structures and GFF3 text.

WWW: http://search.cpan.org/dist/Bio-GFF3/
 2011-04-22 08:51:24 +00:00
Wen Heping
65d8cb8c00 - Update to 0.4.2 2011-04-13 09:11:20 +00:00
Ade Lovett
fe0d23d638 Update to GNU make 3.82 after numerous -exp runs. 2011-04-11 19:54:35 +00:00
Wen Heping
6edfd6fb2e - Update to 0.36 2011-04-01 08:34:03 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Wen Heping
50fb69d7fc - Take maintainership 2011-03-14 00:35:45 +00:00
Thomas Abthorpe
531fedaadc - Reassign to the heap 
PR:		ports/155507 ports/155508
 2011-03-13 06:08:53 +00:00
Wen Heping
34ffacfa25 - Update to 0.35 2011-02-28 01:30:15 +00:00
Martin Wilke
9992960752 - Move over to python2.5 or higher 
- While here kick md5
 2011-02-24 23:25:54 +00:00
Wen Heping
0f9eae8df3 - Update to 0.8 2011-02-15 01:59:12 +00:00
Frederic Culot
365d4641b4 - Update to 1.12.5 
Changes:	http://sourceforge.net/news/?group_id=100316&id=297223
 2011-02-11 13:11:45 +00:00
Martin Wilke
9d6770ef98 - Update to 5.1.09 
PR:		154359
Submitted by:	Ruslan Mahmatkhanov <cvs-src@yandex.ru>
Feature safe:	yes
 2011-01-31 11:45:44 +00:00
Pav Lucistnik
e06433c705 - Unbreak the port; I'm not sure how it could possibly work before 
Reported by:	pointyhat
Feature safe:	yes
 2011-01-27 17:41:16 +00:00
Pav Lucistnik
c44cd0a5c2 - Change depobj for fasta3 to something that does not change on fasta updates 
Reported by:	pointyhat
Feature safe:	yes
 2011-01-27 17:26:45 +00:00
Beat Gaetzi
ae9f790ad1 - Update to 36.3.2 to fix distfile fetching on pointyhat 
PR:		ports/154267
Submitted by:	Fernan Aguero <fernan AT iib.unsam.edu.ar> (maintainer)
Feature safe:	yes
 2011-01-26 20:26:36 +00:00
Pav Lucistnik
a953b88289 - Fix fetch 
Reported by:	pointyhat
Feature safe:	yes
 2011-01-24 21:17:30 +00:00
Philip M. Gollucci
3f26ca6c43 - Fix pkg-plist, got the wrong version before 
Reported by:    pointyhat via pav
 2010-12-30 23:08:47 +00:00
Philip M. Gollucci
116ec22ac1 - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 
PR:             ports/153292
Submitted by:   myself (pgollucci)
Tested by:      -exp run by pav
Approved by:    portmgr (pav)
 2010-12-29 20:04:42 +00:00
Philip M. Gollucci
c58c954676 - Update to 1.4.1 
- Remove MD5

PR:             ports/153394
Submitted by:   myself (pgollucci)
Approved by:    mauricio@arareko.net (maintainer)
Sponsored by:   RideCharge Inc. / TaxiMagic
 2010-12-27 15:11:50 +00:00
Sunpoet Po-Chuan Hsieh
a32defea5d - Use canonical format for FreeBSD.org MAINTAINER addresses 
- Remove obsolete MD5 checksum while I'm here

PR:		ports/152844
Submitted by:	sunpoet (myself)
Approved by:	miwi (with portmgr hat)
 2010-12-25 16:55:41 +00:00
Wen Heping
bba5355e92 - Update to 2.18 
ChangeLog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.18/Changes
 2010-12-23 06:37:08 +00:00
Wen Heping
44a8e2746c - Update to 0.34 2010-12-23 06:33:33 +00:00
Wen Heping
a8874c7021 - Fix fetch 
Reported by:	QAT@
 2010-12-21 00:12:22 +00:00
Wen Heping
0c58bca1ec - Update to 0.33 2010-12-16 08:19:56 +00:00
Philip M. Gollucci
7823a28b14 - Update to 0.32 
With Hat:       perl@
Changes:        http://search.cpan.org/dist/Bio-Phylo/Changes
 2010-12-12 21:29:40 +00:00
Philip M. Gollucci
8563ed7899 - fix fetch: wget is not required for fetching 
Reported by:    QAT
 2010-12-12 08:10:05 +00:00
Ade Lovett
4a8684e352 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
Wen Heping
01c6777188 - Update to 0.4.1 2010-12-02 13:42:09 +00:00
Alexey Dokuchaev
d2da4dcb85 Improve port description. 
Approved by:	maintainer timeout since December 2009
 2010-11-29 08:17:34 +00:00
Philip M. Gollucci
c24f9508d3 - Also remove them from pkg-plist lists not from me that crept in 2010-11-24 06:19:46 +00:00
Wen Heping
fabc490448 - Update to 0.31 2010-11-22 08:50:39 +00:00
Wen Heping
5c243d5c84 - Update to 2.1 2010-11-22 00:15:25 +00:00
Wen Heping
4cfe377eb9 - Update to 0.30 
PR:		ports/152205
Submitted by:	Gea-Suan Lin <gslin@gslin.org>
 2010-11-17 06:24:38 +00:00
Steven Kreuzer
1783398c20 Fix plist. 
Reported by:	QAT
 2010-11-16 23:55:41 +00:00
Wen Heping
f77bbf6dfe - Update to 2.15 
Changelog: http://search.cpan.org/src/LDS/Bio-Graphics-2.15/Changes

PR:		ports/152189
Submitted by:	Gea-Suan Lin <gslin@gslin.org>
 2010-11-16 08:07:27 +00:00
Wen Heping
dbe1b3c46b - Update to 1.5.0 2010-11-10 08:52:26 +00:00
Philippe Audeoud
3ccd369106 - Update to 0.28 2010-11-09 14:15:44 +00:00
Pav Lucistnik
b48012ad65 - Unbreak build: CPP is now part of MAKE_ENV 
Reported by:	pointyhat
 2010-11-08 15:05:11 +00:00
Wen Heping
aa13d40cda - Update to 2.10 
Changelog: http://search.cpan.org/src/RPETTETT/Bio-Das-Lite-2.10/Changes
 2010-11-04 06:24:22 +00:00
Rene Ladan
0fe3bfd649 - Unbreak by removing some old and adding some new master sites 
- Bump PORTREVISION
PR:		ports/151733
Submitted by:	Chris Petrik [c.petrik.sosa gmail.com]
 2010-10-30 23:51:30 +00:00
Wen Heping
a9e02fc8e4 - Update to 0.4.0 2010-10-26 00:34:36 +00:00
Wen Heping
8d82354698 - Update to 0.26 
- Reset maintainer to perl@
 2010-10-25 10:59:25 +00:00
Wen Heping
67d49aa254 - Update to 0.22 2010-10-22 09:29:44 +00:00
Frederic Culot
02a06c807c Update my MAINTAINER address to culot@FreeBSD.org. 
Approved by:	sahil@ (mentor)
 2010-10-20 05:53:20 +00:00
Wen Heping
891ffdbfa0 - Update to 2.14 
ChangeLog: http://search.cpan.org/src/LDS/Bio-Graphics-2.14/Changes
 2010-10-19 10:42:43 +00:00
Ade Lovett
6abd00a86b Punt autoconf267->autoconf268 2010-10-16 11:52:47 +00:00
Wen Heping
34df475911 - Update to 4.2.0 2010-10-08 02:06:53 +00:00
Ade Lovett
7e80cde328 Round one migration of ports from automake{19,110} to automake111 2010-10-05 19:57:56 +00:00
Sunpoet Po-Chuan Hsieh
40d054297f - Add an additional MASTER_SITES 
PR:		ports/151112
Submitted by:	gjb (maintainer)
Approved by:	pgollucci (mentor)
 2010-10-01 01:06:46 +00:00
Erwin Lansing
ea28b70614 Mark BROKEN: does not fetch. 2010-09-30 08:53:18 +00:00
Wen Heping
025752cd44 - Update to 2.13 2010-09-26 08:32:26 +00:00
Wen Heping
c0d7b4a1e1 - Update to 0.76 2010-09-25 08:14:02 +00:00
Martin Matuska
ddcc0de921 Change dependency on old p5-Compress-Zlib, p5-IO-Compress-Base, 
p5-IO-Compress-Zlib and p5-IO-Compress-Bzip2 modules to p5-IO-Compress.
Explicitly depend on p5-IO-Compress only if PERL_LEVEL < 500903
Bump PORTREVISION
 2010-09-21 07:56:43 +00:00
Mark Linimon
033923e0f5 Also broken on sparc64 (and, by implication, ia64). 
Hat:		portmgr
 2010-09-17 09:17:05 +00:00
Maho Nakata
893f4b14c0 Update to 1.3r1.3913. 
Actually the version number is from SVN, and maho@ manually
checked out from SVN.
The source archive is not distributed as tar ball.
 2010-09-16 21:48:04 +00:00
Wen Heping
aa10f7a2b8 - Update to 4.1.0 2010-09-16 03:31:29 +00:00
Ade Lovett
8262a7b51d Autotools update. Read ports/UPDATING 20100915 for details. 
Approved by:	portmgr (for Mk/bsd.port.mk part)
Tested by:	Multiple -exp runs
 2010-09-15 18:35:24 +00:00
Wen Heping
0d034d05fe - Update to 4.4c 2010-09-08 00:16:45 +00:00
Wen Heping
40365a66b5 - Update to 0.75 
- Reset maintainer to perl@
 2010-09-07 07:15:24 +00:00
Wen Heping
a751729898 - Update to 1.13 
PR:		ports/150317
Submitted by:	Frederic Culot <frederic@culot.org>
 2010-09-07 07:00:17 +00:00
Bernhard Froehlich
cc72c8c922 - Update MAINTAINER to submitters new mail address 
PR:		ports/150274
Submitted by:	Glen Barber <glen dot j dot barber at gmail dot com> (maintainer)
Approved by:	beat (co-mentor, implicit)
 2010-09-04 15:32:58 +00:00
Sahil Tandon
4da3929a92 - Update to 2.10.0 
- Add LICENSE
- Mark MAKE_JOBS_SAFE
- Eliminate unnecessary patch
- Note new homepage in pkg-descr
- Pass maintainership to submitter

PR:		ports/149827
Submitted by:	C-S <c-s@c-s.li>
 2010-08-21 00:28:49 +00:00
Greg Larkin
f657360287 - Update USE_PYTHON in Makefile to reflect upstream Python 
dependency version requirement

PR:		ports/149251
Submitted by:	glarkin
Approved by:	wen (via email)
 2010-08-18 14:09:34 +00:00
Andrej Zverev
0429d94053 Update to 1.12: 
- dependency on MooseX::FollowPBP added
- dependency on Moose::Policy removed

PR:		ports/149612
Submitted by:	Frederic Culot <frederic@culot.org>
 2010-08-18 12:05:38 +00:00
Li-Wen Hsu
b3866733aa - Update to 2.1.5 
- Pass maintainership to submitter

PR:		ports/149247
Submitted by:	C-S <c-s AT c-s.li>
 2010-08-04 06:30:07 +00:00
Baptiste Daroussin
a28a217ede Fix typo in maintainer mail address 
Submitted by:	Frederic Culot <frederic _at_ culot.org> (maintainer)
Approved by:	jadawin@ (co-mentor)
 2010-08-02 16:06:38 +00:00
Baptiste Daroussin
3cf9a14670 - Update to 1.12.4 
- Add libcurl as dependency
- Submitter is now maintainer

PR:		ports/149079
Submitted by:	Frederic Coulot <frederic _at_ coulot.org> (maintainer)
Approved by:	jadawin@ (co-mentor)
 2010-08-02 15:09:21 +00:00
Pav Lucistnik
39b767908d - Update the libmap instructions for amd64/8 
Submitted by:	Rick van der Zwet <info@rickvanderzwet.nl>
 2010-07-29 08:30:24 +00:00
Wen Heping
08ad71435d - Update to 1.54 
PR:		ports/148274
Submitted by:	Ju Pengfei <jupengfei@gmail.com>
Approved by:	maintainer
Feature safe:	yes
 2010-07-02 02:57:19 +00:00
Wen Heping
bd3021c9eb - Update to 2.11 
Feature safe:	yes
 2010-06-30 07:41:06 +00:00
Wen Heping
9c661b3e8e - Update to 1.17 
Feature safe:	yes
 2010-06-30 07:36:25 +00:00
Wen Heping
fd6b71cb08 - Update to 1.16 
Feature safe:	yes
 2010-06-24 00:24:22 +00:00
Wen Heping
c58b91a232 - Update to 2.04 
- Pass maintainership to perl@
Feature safe:	yes
 2010-06-22 03:28:49 +00:00
Erwin Lansing
8c6092e5ec BROKEN should not be quoted. 
No functional change.
 2010-06-13 08:40:06 +00:00
Wen Heping
a6a89abfbe - Update to 1.15 2010-06-12 06:18:36 +00:00
Anton Berezin
914f231c85 Update to 1.10. 
Changes:	http://search.cpan.org/dist/Bio-MAGETAB/Changes
 2010-06-10 16:56:04 +00:00
Philip M. Gollucci
aaeac0d126 - Update to 1.4.0 
- Sort pkg-plist
- seperate NOPORTDOCS and NOPORTEXAMPLES
 2010-06-08 00:18:54 +00:00
Dirk Meyer
da5e61df79 LICENSE GPLv2 2010-06-05 19:53:32 +00:00
Dirk Meyer
bad8a42899 LICENSE LGPL21 2010-06-05 06:14:28 +00:00
Wen Heping
e7bd8df79f - Update to 1.4.1 2010-06-01 06:57:30 +00:00
Ade Lovett
8d837132c7 Bounce PORTREVISION for gettext-related ports. Have fun, ya'll. 2010-05-31 02:01:56 +00:00
Sylvio Cesar Teixeira
51df349544 - Update to 3.1.6 
PR:		ports/147194
Submitted by:	Glen Barber <glen.j.barber@gmail.com> (maintainer)
 2010-05-30 23:46:55 +00:00
Dirk Meyer
ca8e128e62 - drop USE_GNUSTEP_PREFIX 2010-05-30 12:28:39 +00:00
Wen Heping
b77703b9d2 - Update to 4.0.1 2010-05-24 07:19:35 +00:00
Dirk Meyer
cf38b673c9 - fix build for gnustep-base 1.21.0 2010-05-23 20:51:27 +00:00
Wen Heping
a5713553a7 - Update to 1.12.2 
- Reset maintainer
 2010-05-21 06:19:18 +00:00
Wen Heping
af88609ea3 - Update to 2.09 2010-05-18 08:27:03 +00:00
Wen Heping
744e974fb0 - Update to 2.0.8 2010-05-14 13:05:15 +00:00
Wen Heping
14923d1dc1 - Update to 2.0.7 
- Set maintainer to perl@
 2010-05-10 02:36:57 +00:00
Sylvio Cesar Teixeira
b5dabfb20d - Update to 3.1.4 
PR:		ports/146411
Submitted by:	Glen Barber <glen.j.barber@gmail.com> (maintainer)
 2010-05-09 13:59:34 +00:00
Wen Heping
b6ad2f761a - Update to 1.00 
- Set maintainer to perl@
 2010-05-08 08:35:32 +00:00
Greg Larkin
44b546fe8c - Removed BROKEN because file fetches and checksums correctly 
- Added another MASTER_SITES for redundancy

PR:		ports/144733
Submitted by:	Fernan Aguero <fernan.aguero@gmail.com> (maintainer)
 2010-04-28 22:37:11 +00:00
Wen Heping
d78cf9ae49 - Update to 2.04 2010-04-20 08:48:47 +00:00
Wen Heping
4834e5f360 - Update to 4.4a 
- Update my mail address to FreeBSD
 2010-04-20 08:42:04 +00:00
Dirk Meyer
2e236823ab - update to 0.81 
- fix build on amd64
 2010-04-14 05:01:48 +00:00
Wen Heping
1c40ab037b - Update to 6.2.0 
Submitted by:	Wen Heping(myself)
Approved by:	maintainer(via Email)
 2010-04-07 01:21:36 +00:00