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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-21 04:06:46 +00:00
freebsd-ports/biology
Wen Heping 08ad71435d - Update to 1.54
PR:		ports/148274
Submitted by:	Ju Pengfei <jupengfei@gmail.com>
Approved by:	maintainer
Feature safe:	yes
2010-07-02 02:57:19 +00:00
..
adun LICENSE GPLv2 2010-06-05 19:53:32 +00:00
ariadne
artemis
avida Mark various ports as broken or ignore on powerpc. 2010-04-01 05:16:19 +00:00
babel Mark various ports as broken or ignore on powerpc. 2010-04-01 05:16:19 +00:00
belvu
biococoa LICENSE LGPL21 2010-06-05 06:14:28 +00:00
biojava
blast - SUB_FILES += pkg-message 2010-01-09 23:51:26 +00:00
blat
boinc-simap - update to 1.4.1 2010-03-28 06:47:48 +00:00
chemeq
clustalw
consed
crimap - actually remove old patch 2010-01-17 00:16:34 +00:00
crux
distribfold
dna-qc BROKEN should not be quoted. 2010-06-13 08:40:06 +00:00
dotter - Removed BROKEN because file fetches and checksums correctly 2010-04-28 22:37:11 +00:00
embassy - Update to 6.2.0 2010-04-07 01:21:36 +00:00
emboss - Update to 6.2.0 2010-04-07 01:21:36 +00:00
fasta Mark various ports as broken or ignore on powerpc. 2010-04-01 05:16:19 +00:00
fasta3
fastdnaml
finchtv
fluctuate
garlic
genpak - update to 1.4.1 2010-03-28 06:47:48 +00:00
gff2ps
gmap
gperiodic Bounce PORTREVISION for gettext-related ports. Have fun, ya'll. 2010-05-31 02:01:56 +00:00
grappa
hmmer
iolib - Update to 1.12.2 2010-05-21 06:19:18 +00:00
jalview
kinemage
L-Breeder - update to 1.4.1 2010-03-28 06:47:48 +00:00
lagan
lamarc - Reset more ports I don't use anymore 2010-02-10 21:47:48 +00:00
libgenome
libsbml - Update to 4.0.1 2010-05-24 07:19:35 +00:00
linux-foldingathome
lsysexp - update to 1.4.1 2010-03-28 06:47:48 +00:00
mafft
mapm3
migrate - Update to 3.1.6 2010-05-30 23:46:55 +00:00
molden
mopac
mrbayes
mummer - Update to 3.22 2010-03-21 17:18:20 +00:00
muscle
ncbi-toolkit - use $SUB_FILES to dynamically adjust pkg-message 2010-01-31 03:42:20 +00:00
njplot
ortep3
p5-AcePerl - Remove unneeded dependencies which is in perl-5.8.9 dist 2010-01-29 14:52:21 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das - Update to 1.17 2010-06-30 07:36:25 +00:00
p5-Bio-Das-Lite - Update to 2.04 2010-06-22 03:28:49 +00:00
p5-Bio-Glite - Remove unneeded dependencies which is in perl-5.8.9 dist 2010-01-29 14:52:21 +00:00
p5-Bio-Graphics - Update to 2.11 2010-06-30 07:41:06 +00:00
p5-Bio-MAGETAB Update to 1.10. 2010-06-10 16:56:04 +00:00
p5-Bio-NEXUS
p5-Bio-Phylo - update to 1.4.1 2010-03-28 06:47:48 +00:00
p5-Bio-SCF - Update to 1.03 2010-01-09 01:21:21 +00:00
p5-bioperl - update to 1.4.1 2010-03-28 06:47:48 +00:00
p5-bioperl-run - update to 1.4.1 2010-03-28 06:47:48 +00:00
paml - Update to 4.4a 2010-04-20 08:42:04 +00:00
phd2fasta
phrap
phred
phylip
phyml
platon
povchem - update to 1.4.1 2010-03-28 06:47:48 +00:00
primer3
protomol - update to 1.4.1 2010-03-28 06:47:48 +00:00
psi88
py-biopython - Update to 1.54 2010-07-02 02:57:19 +00:00
pycogent - Update to 1.4.1 2010-06-01 06:57:30 +00:00
pyfasta - Update to 0.3.9 2010-03-19 08:32:48 +00:00
pymol - update to 1.4.1 2010-03-28 06:47:48 +00:00
python-nexus - Update to 0.7 2010-02-24 01:30:46 +00:00
rasmol
recombine
ruby-bio - Update to 1.4.0 2010-06-08 00:18:54 +00:00
seaview - update to 1.4.1 2010-03-28 06:47:48 +00:00
seqio
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx - update to 1.4.1 2010-03-28 06:47:48 +00:00
tRNAscan-SE
velvet
wise - SBU_FILES += pkg-message 2010-01-08 01:30:20 +00:00
xdrawchem - update to 1.4.1 2010-03-28 06:47:48 +00:00
xmolwt
Makefile p5-Bio-Das-Lite is an implementation of a client for the DAS protocol (XML 2010-03-01 09:16:25 +00:00