Antoine Brodin b2c1becd27 Fix a stage symlink. ... There may be still some problems with this port: /usr/local/bin/definitions.K is referring to /wrkdirs/usr/ports/science/cdf/work/stage /usr/local/bin/definitions.B is referring to /wrkdirs/usr/ports/science/cdf/work/stage /usr/local/bin/definitions.C is referring to /wrkdirs/usr/ports/science/cdf/work/stage		2014-02-03 23:34:26 +00:00
..
2d-rewriter
2dhf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
abinit	science/abinit: depends explicitly on "python"	2013-12-15 12:49:28 +00:00
afni	Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;	2013-11-13 08:19:34 +00:00
avogadro	- Update from 1.1.0 to 1.1.1	2013-12-18 23:33:20 +00:00
bddsolve	Convert LIB_DEPENDS for ports depending on boost	2013-12-12 14:15:03 +00:00
bft	- Stage support	2014-02-03 09:44:35 +00:00
bodr	- Update to version 10	2013-11-02 17:34:59 +00:00
brian	Python cleanup:	2014-01-13 21:00:02 +00:00
buddy	Reset maintainer for llwang@infor.org	2013-12-18 10:38:33 +00:00
cdcl
cdf	Fix a stage symlink.	2014-02-03 23:34:26 +00:00
cdo
cgnslib	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
checkmol
chemical-mime-data
chemtool
chemtool-devel	science/chemtool-devel: Unbreak on FreeBSD 10+	2013-12-25 22:08:13 +00:00
clhep
colt
crf++	Fix properties on pkg-plist	2014-01-21 23:40:21 +00:00
dcl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
devisor
dlpoly-classic	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
dtiquery
ecs	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
elmer-eio	- Stage support	2014-02-03 14:31:32 +00:00
elmer-hutiter	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
elmer-matc	- Stage support	2014-02-03 13:57:46 +00:00
elmer-meshgen2d
elmergrid
elmerpost	science/elmer(post,-matc): Use modern fortran, unbreak, undeprecate	2013-12-26 02:47:52 +00:00
epte
euler
fastcap
fasthenry
felt
fisicalab	Update core GNUstep libraries and fisicalab to latest versions	2014-01-12 22:54:58 +00:00
flounder	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
fvcom	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
fvcom-mpi
fvm	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
g3data
gamess	uncomment MANUAL_PACKAGE_BUILD.	2013-11-29 01:45:50 +00:00
gchemutils	Add patch to unbreak with libc++ 10.0+.	2013-12-03 22:10:25 +00:00
gdis
getdp	- Implement staging.	2014-01-27 15:15:04 +00:00
ghemical	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ghmm	Fix properties on pkg-plist	2014-01-21 23:40:21 +00:00
gnudatalanguage	Python cleanup:	2014-01-13 21:00:02 +00:00
gramps	Python cleanup:	2014-01-13 21:00:02 +00:00
gromacs	- USES=fortran.	2013-12-27 16:39:52 +00:00
gsmc	- Enable staging	2013-12-30 22:50:38 +00:00
gtamsanalyzer
gwyddion	- Update from 2.33 to 2.34	2014-01-03 00:08:56 +00:00
h5utils
harminv	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
hdf	New LIB_DEPENDS syntax, USES=fortran, staging.	2013-12-27 16:55:28 +00:00
hdf5
hdf5-18	- Fix PKGNAME collision	2013-12-11 18:38:53 +00:00
hdf-java	- Convert to dos2unix.mk	2013-11-19 23:08:44 +00:00
hs-bio	- Stagify lang/ghc and all the Haskell Cabal ports	2014-01-09 21:32:12 +00:00
InsightToolkit	Now when it builds on 10.x, drop maintainership	2013-12-21 00:28:51 +00:00
isaac-cfd	- USES=fortran gmake.	2013-12-27 20:26:21 +00:00
jmol	- Update to version 13.2.3 [1]	2013-11-07 16:53:33 +00:00
jstrack	- Convert to USES=tk	2014-01-14 10:30:24 +00:00
kalzium	- Update from 1.1.0 to 1.1.1	2013-12-18 23:33:20 +00:00
kst2	Add patches to fix build on 10 and head	2013-12-09 15:08:42 +00:00
lamprop
libctl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
libghemical	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
libint
libkml	- Update LICENSE	2013-12-26 21:48:54 +00:00
liblinear
liboglappth	- Stage support	2014-02-03 14:31:32 +00:00
libquantum	- Stage support	2014-02-03 13:57:46 +00:00
libsvm
libsvm-python
linsmith	- Remove manual creation and removal of share/applications, as it's now in the mtree (categories starting with [st])	2013-10-22 14:01:38 +00:00
massxpert	- Remove manual creation and removal of share/applications, as it's now in the mtree (categories starting with [st])	2013-10-22 14:01:38 +00:00
mbdyn	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mcstas	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
medit
meep	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mei	- Upgrade to 1.0.4;	2013-11-26 21:30:22 +00:00
minc	Part 2 at removing now useless FETCH_ARGS redifition	2014-01-03 01:12:59 +00:00
minc2	- Downgrade to the latest stable release;	2014-01-29 17:31:04 +00:00
mol2ps
mpb	- New LIB_DEPENDS syntax.	2013-12-27 21:28:47 +00:00
mpqc	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mpqc-mpich
ncs	science/ncs: fix 'python' usage to remove implicity dependency of lang/python	2013-12-17 21:55:48 +00:00
netcdf	- Fix PKGNAME collision	2013-11-06 17:34:52 +00:00
netcdf3-ftn	- Fix PKGNAME collision	2013-11-06 17:35:50 +00:00
netcdf4	- Use CONFLICTS_INSTALL instead of CONFLICTS	2013-12-10 19:17:08 +00:00
netcdf-ftn	- Remove LATEST_LINK	2013-12-10 19:18:39 +00:00
nifticlib	Update to v2.0.0 and patch for clang.	2014-01-29 21:44:59 +00:00
openbabel	Add upstream patch to fix the build with libc++.	2013-11-13 15:49:25 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-Bond-Find	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-Canonicalize	- add stage support	2014-01-29 17:18:46 +00:00
p5-Chemistry-Elements	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-File-MDLMol	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-File-Mopac	- add stage support	2014-01-29 17:18:46 +00:00
p5-Chemistry-File-PDB	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-File-SLN	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-File-SMARTS	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-File-SMILES	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-File-VRML	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-File-XYZ	- add stage support	2014-01-29 17:18:46 +00:00
p5-Chemistry-FormulaPattern	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-InternalCoords	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-Isotope	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-MacroMol	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-MidasPattern	- add stage support	2014-01-29 17:18:46 +00:00
p5-Chemistry-Mok	- Stage support	2014-02-01 14:41:07 +00:00
p5-Chemistry-Mol	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-Pattern	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-Reaction	- add stage support	2014-01-29 17:00:41 +00:00
p5-Chemistry-Ring	- add stage support	2014-01-29 17:00:41 +00:00
p5-Geo-BUFR	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB	- add stage support	2014-01-29 17:00:41 +00:00
p5-Geo-WebService-Elevation-USGS	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-PerlMol	- add stage support	2014-01-29 17:00:41 +00:00
p5-Physics-Unit
paje
paraview	Update freetype to 2.5.2.	2013-12-24 21:22:21 +00:00
peekabot	Deprecate ports broken for more than 6 month	2014-01-27 17:35:26 +00:00
pnetcdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
psi3	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
psychopy	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-coards	science/py-coards: Modernise and enable STAGE support	2014-01-26 00:52:15 +00:00
py-DendroPy
py-h5py	science/py-h5py: update to 2.2.1	2013-12-13 19:59:42 +00:00
py-hcluster	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-mdp	science/py-mdp: support staging	2013-12-29 11:39:54 +00:00
py-mlpy	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-netCDF4	science/py-netCDF4: support staging	2013-12-29 11:41:17 +00:00
py-obspy	- Fix build with distribute -> setuptools change	2013-11-27 19:21:00 +00:00
py-paida
py-pupynere	science/py-pupynere: Modernise: Enable STAGE, AUTOPLIST and more	2014-02-03 11:35:53 +00:00
py-pyaixi	Python cleanup:	2014-01-13 21:00:02 +00:00
py-pydap	science/py-pydap: update to 3.1.1	2013-11-29 11:40:24 +00:00
py-pydicom
py-scikit-learn	Use PYDISTUTILS_AUTOPLIST.	2013-11-05 12:37:28 +00:00
py-scimath	- Update WWW:	2013-11-20 20:51:25 +00:00
py-scipy	- Fix distinfo	2013-11-18 15:36:42 +00:00
py-ws2300
pybrain	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pycdf	Python cleanup:	2014-01-13 21:00:02 +00:00
pynn	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pyteomics	Update to 2.2.1	2013-11-29 11:57:18 +00:00
pyteomics.biolccc	Use PYDISTUTILS_AUTOPLIST	2014-01-23 08:42:15 +00:00
qcl	- Update to version 0.6.3	2013-10-30 17:57:33 +00:00
qtresistors	- Convert to USES=qmake (and other USES while I'm here)	2013-11-22 12:55:00 +00:00
R-cran-AMORE	Fix DISTNAME	2014-02-01 14:02:24 +00:00
R-cran-bayesm	Fix DISTNAME	2014-02-01 13:58:01 +00:00
R-cran-DCluster	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-e1071	- Update to 1.6-2	2014-01-12 12:19:47 +00:00
R-cran-eco	Fix DISTNAME	2014-02-01 13:49:09 +00:00
R-cran-Epi	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-epicalc	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-snow	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-som	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
ruby-dcl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ruby-gphys	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ruby-netcdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
rubygem-ai4r	- Add stage support	2013-10-30 02:56:33 +00:00
sigrok-cli	- Update to 0.2.2	2014-01-27 19:15:36 +00:00
silo	- Update from 4.9 to 4.9.1	2013-12-18 23:27:40 +00:00
simlib
step	Add my upstream commit that fixes the build with libc++.	2013-11-03 22:48:12 +00:00
svmlight	Fix properties on pkg-plist	2014-01-21 23:40:21 +00:00
szip
udunits
v_sim	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
veusz	- Update to 1.19.1	2013-12-22 14:33:44 +00:00
vmd
voro++
x11iraf
xfce4-equake-plugin	- Update to 1.3.4	2014-01-31 12:27:20 +00:00
xmakemol
xmds
Makefile	The sigrok project aims at creating a portable, cross-platform,	2014-01-03 00:13:11 +00:00