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Code Issues Releases Activity
freebsd-ports/biology
History
Baptiste Daroussin 35c339abf0 Remove Authors from pkg-descr
2015-03-02 23:09:43 +00:00
..
ariadne
misc/otter & biology/ariadne: Not jobs safe
2015-01-21 18:39:11 +00:00
artemis
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avida
Cleanup plist
2014-12-20 17:27:08 +00:00
babel
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biococoa
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biojava
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blat
Update to upstream version 36
2015-01-01 18:17:53 +00:00
chemeq
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clustalw
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consed
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crux
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emboss
Bump portrevision after png update
2014-12-25 20:54:41 +00:00
fasta
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fasta3
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fastdnaml
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fluctuate
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garlic
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gff2ps
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gmap
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gperiodic
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grappa
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hmmer
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htslib
HTSlib is an implementation of a unified C library for accessing common file
2014-12-14 22:35:07 +00:00
iolib
- Update to 1.13.9
2015-01-30 21:49:29 +00:00
jalview
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lagan
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lamarc
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libsbml
- Convert USE_PYTHON -> USES leftovers missed in the previous commits
2015-01-04 08:23:23 +00:00
linux-foldingathome
Cleanup plist
2014-12-20 17:27:08 +00:00
mafft
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mapm3
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migrate
- Update to 3.6.6
2015-01-31 06:35:24 +00:00
molden
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mopac
- Upadate biology/mopac to version 1.15
2014-12-16 22:10:23 +00:00
mrbayes
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mummer
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muscle
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ncbi-blast+
Fix PKGNAMEPREFIX of biology/ncbi-blast+, so that the resulting package is
2014-12-31 00:31:55 +00:00
ncbi-toolkit
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njplot
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ortep3
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p5-AcePerl
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p5-Bio-ASN1-EntrezGene
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p5-Bio-Das
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p5-Bio-Das-Lite
Remove TEST dependency on p5-Test-Simple when the version in core is
2015-02-26 16:54:41 +00:00
p5-Bio-GFF3
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p5-Bio-Glite
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p5-Bio-Graphics
- Update to 2.39
2014-12-07 07:44:06 +00:00
p5-Bio-MAGETAB
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p5-Bio-NEXUS
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p5-Bio-Phylo
- Update to 0.58
2014-12-07 04:41:47 +00:00
p5-Bio-SCF
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p5-bioperl
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p5-bioperl-run
- Simplify Makefile
2015-01-18 22:49:09 +00:00
paml
- Pass maintainership to submitter
2015-01-19 12:11:25 +00:00
phrap
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phred
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phylip
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phyml
Convert to USES=autoreconf
2014-12-28 19:14:13 +00:00
platon
Mark BROKEN: Unfetchable
2015-01-10 09:41:07 +00:00
plink
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plinkseq
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povchem
Cleanup plist
2014-12-20 17:27:08 +00:00
primer3
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protomol
Bump portrevision after png update
2014-12-25 20:54:41 +00:00
psi88
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py-biopython
biology/py-biopython:
2015-01-19 20:21:12 +00:00
pycogent
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pyfasta
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python-nexus
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recombine
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ruby-bio
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samtools
Samtools implements various utilities for post-processing alignments in the
2014-12-15 21:59:19 +00:00
seaview
Mark BROKEN: Fails to link, tries to use internal fltk symbols
2015-02-21 07:35:32 +00:00
seqan
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seqio
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seqtools
biology/seqtools: 4.31 -> 4.32
2015-02-12 12:04:09 +00:00
sim4
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ssaha
Cleanup plist
2014-12-20 17:27:08 +00:00
t_coffee
Remove Authors from pkg-descr
2015-03-02 23:09:43 +00:00
tinker
Mark BROKEN: Checksum and size mismatch
2015-01-31 09:49:22 +00:00
treepuzzle
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treeviewx
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tRNAscan-SE
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ugene
Update Unipro UGENE to version 1.16.0 (documentation was also rerolled).
2015-02-24 11:42:53 +00:00
velvet
Designatate 4 ports as unsafe for parallel building
2015-01-19 17:43:57 +00:00
wise
Cleanup plist
2014-12-20 17:27:08 +00:00
xmolwt
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Makefile
Remove expired ports:
2015-01-01 01:13:11 +00:00