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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-05 01:55:52 +00:00
freebsd-ports/biology
Mario Sergio Fujikawa Ferreira 8a51d4351d Mark BROKEN due to "Unknown problem"
Submitted by:	maintainer
2002-11-25 02:11:13 +00:00
..
artemis Initial import of artemis 4.0 2001-12-22 14:39:40 +00:00
avida Make biology/avida building on -current again 2002-11-03 23:40:02 +00:00
babel o Rollback PORTCOMMENT modifications while this feature's implementation 2002-11-10 16:48:51 +00:00
biojava Unbreak this port: 2002-06-16 01:08:49 +00:00
chemeq upgrade to V110-1 2002-04-21 13:33:29 +00:00
clustalw - Add a new patch 2002-03-27 14:01:57 +00:00
coalesce
crimap Add crimap 2.4, a tool for the creation of multilocus linkage maps. 2002-03-27 14:42:56 +00:00
deft PERL -> REINPLACE 2002-11-04 05:46:38 +00:00
distribfold Update CATEGORIES as per ports/44331. 2002-10-21 10:59:11 +00:00
dna-qc PERL -> REINPLACE 2002-11-04 05:46:38 +00:00
emboss - Unbreak fetching of distfiles. (Needs update as soon as freeze is over.) 2002-09-27 08:58:19 +00:00
fasta
fasta3 Prefer <limits.h> over <values.h> as the latter has been removed from 2002-08-23 03:36:33 +00:00
fastdnaml
flip PERL -> REINPLACE 2002-11-04 05:46:38 +00:00
fluctuate
gaussian98 Remove USE_NEWGCC, which is no longer supported or required. 2002-08-31 02:38:29 +00:00
genpak o Rollback PORTCOMMENT modifications while this feature's implementation 2002-11-10 16:48:51 +00:00
gff2ps PERL -> REINPLACE 2002-11-04 01:56:21 +00:00
gperiodic Deploy USE_GNOMENG infrastructure 2002-08-30 12:59:40 +00:00
grappa
hmmer - Add patch that will, for -CURRENT only, change: -pthread -> -lc_r 2002-07-11 10:52:14 +00:00
kinemage
L-Breeder Mark BROKEN due to "Unknown problem" 2002-11-25 02:11:13 +00:00
lamarc
libgenome Fix PORTCOMMENTs that were killing INDEX builds. 2002-11-07 03:10:58 +00:00
migrate
molden Note distribution term. 2002-05-27 06:25:53 +00:00
mopac
nab PERL -> REINPLACE 2002-11-04 01:56:21 +00:00
ncbi-toolkit add forgotten "USE_REINPLACE=yes" 2002-09-21 14:56:18 +00:00
nclever
ortep3
p5-AcePerl CC, CXX, CFLAGS, PTHREAD_CFLAGS and PTHREAD_LIBS may contain `/' in 2002-10-10 12:59:36 +00:00
p5-bioperl - Update to version 0.7.2, somewhat overdue. :-) 2002-01-25 11:46:09 +00:00
p5-bioperl-devel
paml
phylip Update to version 3.6.a3. 2002-08-13 16:07:45 +00:00
pkg
platon
povchem PERL -> REINPLACE 2002-11-04 02:35:01 +00:00
primer3 Updated to fix problems as stated in PR ports/42915 2002-11-07 13:45:17 +00:00
psi88
py-biopython Use $PYNUMERIC in the dependencies. 2002-07-15 11:37:35 +00:00
pymol 1. add a missing dependency on png and unbreak. 2002-11-19 23:01:49 +00:00
rasmol o Rollback PORTCOMMENT modifications while this feature's implementation 2002-11-10 16:48:51 +00:00
recombine
ruby-bio Use RUBY_MOD*. 2002-10-06 21:08:30 +00:00
seaview unbroke by upgrade to 20021018 2002-11-20 14:03:25 +00:00
seqio
sim4 Update to sim4-2002.03.03 to unbreak build. 2002-05-04 21:45:10 +00:00
spdbv Swiss-PdbViewer is an application that provides a user friendly interface 2002-04-02 16:18:53 +00:00
t_coffee Add t_coffee 1.37, a multiple DNA or protein sequence alignment package. 2002-01-25 14:58:16 +00:00
tinker Upgrade tinker to the latest revision 2002-01-19 15:15:16 +00:00
treepuzzle add treepuzzle 5.1 2002-11-20 08:54:10 +00:00
treeviewx Chase new name of wxgtk shared library. 2002-09-09 14:21:08 +00:00
tRNAscan-SE Port needs perl to build. 2002-11-04 01:47:57 +00:00
wise Modify replace RE to match syntax of sed now ("\)" -> ")" 2002-11-05 01:44:12 +00:00
xdrawchem Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command; 2002-01-29 09:39:59 +00:00
xmolwt Deploy USE_GNOMENG infrastructure 2002-08-30 12:59:40 +00:00
Makefile add treepuzzle 5.1 2002-11-20 08:54:10 +00:00