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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-24 04:33:24 +00:00
freebsd-ports/biology
Rong-En Fan b06ef1af5b - Project moves to a new home. Change MASTER_SITES and WWW
PR:		ports/108214
Submitted by:	Thomas Abthorpe <thomas at goodking.ca>
Approved by:	Fernan Aguero <fernan at iib.unsam.edu.ar> (maintainer)
2007-01-22 23:22:53 +00:00
..
adun - update to use new bsd.gnustep.mk 2007-01-13 03:57:25 +00:00
ariadne Remove USE_REINPLACE from all categories starting with B 2006-05-03 23:26:35 +00:00
artemis
avida Mark as broken for i386 4.x 2006-08-10 23:02:49 +00:00
babel
belvu Distfile now checksums successfully. 2006-10-14 16:13:49 +00:00
biococoa The BioCocoa framework provides developers with the opportunity to add 2006-12-30 09:20:54 +00:00
biojava Reset whitekid@gmail.com after timeouts and no response to email. 2006-12-13 12:56:01 +00:00
blast - Update PORTREVISION to match latest release (see main web site) 2006-06-11 09:13:43 +00:00
blat
boinc-simap - Add hmmer 5.09 application 2006-10-10 11:31:42 +00:00
chemeq
clustalw
coalesce - Deprecate 2006-12-10 12:37:38 +00:00
crimap Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response 2006-12-26 12:46:34 +00:00
distribfold USE_SIZE was obsoleted in rev. 1.484 of bsd.port.mk more than 2006-06-11 15:29:01 +00:00
dna-qc Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response 2006-12-26 12:46:34 +00:00
dotter Unmark BROKEN, it seems to be caused by a stale distfile on ftp-master. 2006-08-03 20:28:00 +00:00
embassy
emboss
fasta Update to 21.u1.d1 (fixes fetch). 2006-05-07 13:04:20 +00:00
fasta3 - Update to 34.t26.b3 2006-10-31 09:02:04 +00:00
fastdnaml
finchtv
fluctuate - Deprecate 2006-12-10 12:37:38 +00:00
garlic Remove USE_REINPLACE from all categories starting with B 2006-05-03 23:26:35 +00:00
genpak
gff2ps . change dependencies: shells/bash2 -> shells/bash; 2007-01-16 18:21:00 +00:00
gmap Add gmap 2006.04.21, a Genomic Mapping and Alignment Program for mRNA 2006-09-29 04:05:55 +00:00
gperiodic Chase the GNOME X11BASE to LOCALBASE move, and fix the build with the 2006-10-14 08:54:54 +00:00
grappa Reset dbader@ece.unm.edu due to timeouts and no response to email. 2006-12-13 13:20:20 +00:00
hmmer
jalview
kinemage - Respect X11BASE 2006-11-27 22:03:22 +00:00
L-Breeder - Use features of bsd.wx.mk, especially USE_WX 2006-12-01 07:39:02 +00:00
lagan
lamarc
libgenome - s,INSTALLS_SHLIB,USE_LDCONFIG,g 2006-08-14 10:08:25 +00:00
linux-foldingathome Folding@Home is a distributed computing project -- people from through out the 2006-08-28 22:33:45 +00:00
lsysexp - Add MASTER_SITE 2006-06-06 10:07:55 +00:00
mafft
migrate - Update to 2.1.3 2006-12-10 12:39:32 +00:00
molden Using only gfortran42. not gcc42. 2007-01-12 05:39:18 +00:00
mopac - Fix pkg-plist [1] 2006-07-10 05:32:58 +00:00
nab - Update to 5.1.2 2006-12-23 21:45:17 +00:00
ncbi-toolkit - Respect X11BASE 2006-12-09 07:49:55 +00:00
ortep3 Fix build. 2007-01-19 06:41:03 +00:00
p5-AcePerl - Mark broken on amd64 < 6. We got following 2006-12-04 04:13:30 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das - Update to 1.03 2006-12-19 06:47:45 +00:00
p5-Bio-Phylo Update to v0.15 2006-12-27 18:58:26 +00:00
p5-bioperl
p5-bioperl-devel
p5-bioperl-run
p5-bioperl-run-devel Bioperl-run contain modules that provides a PERL interface to various 2006-05-02 21:31:43 +00:00
paml - Update to 3.15 2006-05-20 18:52:19 +00:00
phylip Reset dbader@ece.unm.edu due to timeouts and no response to email. 2006-12-13 13:20:20 +00:00
platon * Migrate to gfortran. 2007-01-17 05:30:10 +00:00
povchem Remove USE_REINPLACE from all categories starting with B 2006-05-03 23:26:35 +00:00
primer3 - Update to 1.0.1 2006-12-29 23:40:53 +00:00
protomol Add protomol 2.0.3, OO, component based, framework for molecular 2006-05-05 20:09:54 +00:00
psi88 Forgot to commit a patch. Fixes build. 2007-01-19 02:19:06 +00:00
py-biopython - Update to 1.42 2006-10-31 13:25:21 +00:00
pymol Fix build on amd64 2006-09-17 11:51:56 +00:00
rasmol
recombine - Deprecate 2006-12-10 12:37:38 +00:00
ruby-bio
seaview Chase pdf library and bump PORTREVISION. 2006-10-09 08:18:35 +00:00
seqio Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response 2006-12-26 12:46:34 +00:00
sim4 Remove USE_REINPLACE from all categories starting with B 2006-05-03 23:26:35 +00:00
t_coffee - Project moves to a new home. Change MASTER_SITES and WWW 2007-01-22 23:22:53 +00:00
tinker * Migrate to gfortran. 2007-01-12 12:21:21 +00:00
treepuzzle
treeviewx - Allow wxWidgets 2.6 alongside 2.4, this port works with both 2006-10-09 07:16:37 +00:00
tRNAscan-SE
wise Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response 2006-12-26 12:46:34 +00:00
xdrawchem Mark as BROKEN on sparc64 due to internal compiler error. 2006-07-03 22:22:09 +00:00
xmolwt
Makefile The BioCocoa framework provides developers with the opportunity to add 2006-12-30 09:20:54 +00:00