Eitan Adler 6b720eaf70 Convert a few remaining straglers from the unmaintined ports to pathfix		2013-03-28 17:56:37 +00:00
..
2d-rewriter
2dhf
abinit
afni	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
avogadro	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
bddsolve
bft
bodr
brian	- Update to 1.4.0	2012-09-04 07:13:08 +00:00
buddy
cdcl	Update to 5.4.7	2012-12-19 03:01:41 +00:00
cdf
cdo	This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix.	2013-03-19 13:04:30 +00:00
cgnslib	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
checkmol	- Update to 0.4d	2013-03-02 06:30:55 +00:00
chemical-mime-data
chemtool
chemtool-devel
clhep
colt	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
crf++
dcl	- Update to 5.4.7	2012-12-13 02:25:38 +00:00
devisor	Style: tab -> space.	2013-03-28 16:28:59 +00:00
dlpoly-classic
dtiquery
ecs	Chase french/med upgrade.	2013-03-19 20:35:32 +00:00
elmer-eio
elmer-hutiter
elmer-matc
elmer-meshgen2d
elmergrid
elmerpost
epte	- Update to 2.0.8	2012-08-06 07:19:41 +00:00
euler
fastcap
fasthenry	update to 3.0wr-021113	2013-03-28 01:06:02 +00:00
felt	- Update to version 3.07	2012-12-01 00:00:12 +00:00
flounder	- Fix build with clang	2012-12-23 19:11:12 +00:00
fvcom	Add new ports science/fvcom and science/fvcom-mpi:	2013-02-20 17:30:45 +00:00
fvcom-mpi	Add new ports science/fvcom and science/fvcom-mpi:	2013-02-20 17:30:45 +00:00
fvm	Chase french/med upgrade.	2013-03-19 20:35:32 +00:00
g3data
gamess	update to 2012/5/1 R2 version.	2013-03-05 11:43:18 +00:00
gchemutils	science/openbabel:	2012-12-11 14:19:54 +00:00
gdis	- Update to 0.90	2013-03-02 06:29:42 +00:00
getdp	- forgot to remove a file in the last update.	2012-11-08 00:02:06 +00:00
ghemical	Update to 3.0.0.	2013-01-08 10:50:11 +00:00
ghmm
gnudatalanguage	Add an explicit dependency on pkgconf	2013-03-22 12:36:06 +00:00
gramps	Convert a few remaining straglers from the unmaintined ports to pathfix	2013-03-28 17:56:37 +00:00
gromacs	- Update to 4.6.1	2013-03-24 16:27:23 +00:00
gsmc
gsystem	- Deprecate QT3, KDE3 and unmaintained ports depending on them. QT 3.3.8	2012-12-30 12:03:51 +00:00
gtamsanalyzer
gwyddion	Mechanically convert unmaintained ports which use "gnomehack" to use "pathfix" instead.	2013-03-28 03:28:30 +00:00
h5utils
harminv
hdf	- Update to 4.2.8.	2012-12-20 05:41:13 +00:00
hdf5
hdf5-18
hdf-java	Convert to new option framework	2012-12-13 10:47:44 +00:00
hs-bio	- Fix breakage in the DYNAMIC-enabled ports triggered by the recent	2013-02-05 22:26:31 +00:00
InsightToolkit	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
isaac-cfd	Style: tab -> space.	2013-03-28 16:28:59 +00:00
jmol	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
jstrack	- update to 3.3.4 (old version isn't fetchable anymore)	2012-11-08 11:40:29 +00:00
kalzium	KDE/FreeBSD team presents KDE SC 4.10.1 ports!	2013-03-27 11:55:25 +00:00
kmovisto	- Deprecate QT3, KDE3 and unmaintained ports depending on them. QT 3.3.8	2012-12-30 12:03:51 +00:00
kst	- Deprecate QT3, KDE3 and unmaintained ports depending on them. QT 3.3.8	2012-12-30 12:03:51 +00:00
kst2	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
lamprop
libctl	Generalize the BROKEN message to remove i386 reference	2013-03-17 14:15:48 +00:00
libghemical	This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix.	2013-03-19 13:04:30 +00:00
libint
libkml	Fix typos and make small modifications in COMMENT (according to Porter's	2012-08-03 15:54:35 +00:00
liblinear
liboglappth	This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix.	2013-03-19 13:04:30 +00:00
libquantum
libsvm
libsvm-python
linsmith	- Fix build with clang	2013-02-07 14:36:55 +00:00
massxpert	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
mayavi	- Update *_DEPENDS on x11-toolkits/py-tkinter after _tkinter.so relocation	2013-03-02 22:32:48 +00:00
mbdyn
mcstas	- Fix warning when building in a jail	2013-03-14 00:52:09 +00:00
medit	Upgrade to 2012.02.05.	2012-11-22 21:39:32 +00:00
meep	- Convert to Optionsng	2013-03-14 11:20:54 +00:00
mei
minc
minc2
mol2ps	- Update to 0.3	2013-03-02 14:54:19 +00:00
mpb
mpqc	Fix recent build on tinderbox. Somehow "sc_PsiCCSD_T.3" is not	2013-01-08 04:49:03 +00:00
mpqc-mpich
ncs	Bump PORTREVISON after devel/py-sip and devel/qscintilla2 update.	2013-02-03 18:16:54 +00:00
netcdf
netcdf3-ftn
netcdf4	This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix.	2013-03-19 13:04:30 +00:00
netcdf-ftn
nifticlib
omnetpp
openbabel	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
ovt	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol	- Trim Makefile headers	2012-12-07 07:13:56 +00:00
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol	- Trim Makefile headers	2012-12-06 02:12:52 +00:00
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter	Cleanup supporting perl version 5.8 and 5.10,	2012-12-17 06:15:27 +00:00
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS	Update to 0.011.	2013-01-29 08:50:49 +00:00
p5-PerlMol
p5-Physics-Unit
paje
paraview	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
peekabot	This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix.	2013-03-19 13:04:30 +00:00
pnetcdf	- Update to 1.3.1	2012-09-30 04:19:04 +00:00
psi3	- Fix all cases of 'No newline at end of file' in ports tree	2013-02-01 15:04:00 +00:00
psychopy	- Update to 1.76.0	2013-03-24 14:19:01 +00:00
py-DendroPy
py-h5py
py-hcluster
py-mdp	- Update to 3.2	2012-08-08 21:27:15 +00:00
py-mlpy
py-netCDF4	- Update to 1.0.2	2012-11-27 03:28:28 +00:00
py-obspy-core	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.db	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.gse2	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.imaging	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.iris	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.mseed	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.signal	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.taup	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.wav	- Trim Makefile headers	2012-10-10 06:46:07 +00:00
py-obspy.xseed	- Update to 0.7.0	2012-10-10 06:25:58 +00:00
py-paida	- Update *_DEPENDS on x11-toolkits/py-tkinter after _tkinter.so relocation	2013-03-02 22:32:48 +00:00
py-pydicom	Fix typos and make small modifications in COMMENT (according to Porter's	2012-08-03 15:54:35 +00:00
py-scikit-learn	Update to version 0.13.1.	2013-03-11 14:11:26 +00:00
py-scimath
py-scipy	- update to 0.11.0	2012-10-17 06:15:16 +00:00
py-ws2300	- Update to 1.7 [1]	2012-12-09 13:19:39 +00:00
pybrain
pycdf
pynn	- Update to 0.7.5	2013-03-02 05:49:40 +00:00
pyteomics	Add new port science/pyteomics:	2013-03-28 13:05:42 +00:00
pyteomics.biolccc	- Rename pyBioLCCC to pyteomics.biolccc (follow upstream)	2013-03-28 13:10:23 +00:00
qcl
qtresistors
R-cran-AMORE	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-bayesm	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-DCluster	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-e1071	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-eco	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-Epi	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-epicalc	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
R-cran-snow	- Update to 0.3-12	2013-03-27 20:52:59 +00:00
R-cran-som	update math/R to 2.15.3, and adjust dependent ports	2013-03-07 04:21:34 +00:00
ruby-dcl
ruby-gphys	- Update to 1.2.2	2013-01-22 03:31:11 +00:00
ruby-netcdf
rubygem-ai4r	- Add patch to fix build	2013-02-26 02:34:03 +00:00
silo	- Update to 4.9	2013-03-02 14:49:28 +00:00
simlib
step	KDE/FreeBSD team presents KDE SC 4.10.1 ports!	2013-03-27 11:55:25 +00:00
svmlight
szip
udunits
v_sim	science/openbabel:	2012-12-11 14:19:54 +00:00
veusz	Bump PORTREVISON after devel/py-sip and devel/qscintilla2 update.	2013-02-03 18:16:54 +00:00
vmd	Fix minor nit: use the canconical FreeBSD.org form for email addresses.	2013-03-17 16:44:03 +00:00
x11iraf
xmakemol	Switch from libglut to freeglut and retire libglut. Libglut hasn't been	2012-08-04 22:52:02 +00:00
xmds
Makefile	- Rename pyBioLCCC to pyteomics.biolccc (follow upstream)	2013-03-28 13:10:23 +00:00