Martin Matuska ddcc0de921 Change dependency on old p5-Compress-Zlib, p5-IO-Compress-Base, ... p5-IO-Compress-Zlib and p5-IO-Compress-Bzip2 modules to p5-IO-Compress. Explicitly depend on p5-IO-Compress only if PERL_LEVEL < 500903 Bump PORTREVISION		2010-09-21 07:56:43 +00:00
..
adun	LICENSE GPLv2	2010-06-05 19:53:32 +00:00
ariadne
artemis
avida	Also broken on sparc64 (and, by implication, ia64).	2010-09-17 09:17:05 +00:00
babel	Mark various ports as broken or ignore on powerpc.	2010-04-01 05:16:19 +00:00
belvu
biococoa	LICENSE LGPL21	2010-06-05 06:14:28 +00:00
biojava
blast	- SUB_FILES += pkg-message	2010-01-09 23:51:26 +00:00
blat
boinc-simap	- Update the libmap instructions for amd64/8	2010-07-29 08:30:24 +00:00
chemeq
clustalw	- Fix fetch error	2009-12-27 03:05:03 +00:00
consed
crimap	- actually remove old patch	2010-01-17 00:16:34 +00:00
crux
distribfold
dna-qc	BROKEN should not be quoted.	2010-06-13 08:40:06 +00:00
dotter	- Removed BROKEN because file fetches and checksums correctly	2010-04-28 22:37:11 +00:00
embassy	- Update to 6.2.0	2010-04-07 01:21:36 +00:00
emboss	- Update to 6.2.0	2010-04-07 01:21:36 +00:00
fasta	Mark various ports as broken or ignore on powerpc.	2010-04-01 05:16:19 +00:00
fasta3
fastdnaml
finchtv
fluctuate	For ports maintained by ports@FreeBSD.org, remove names and/or	2009-12-21 02:19:12 +00:00
garlic
genpak	- update to 1.4.1	2010-03-28 06:47:48 +00:00
gff2ps
gmap
gperiodic	Bounce PORTREVISION for gettext-related ports. Have fun, ya'll.	2010-05-31 02:01:56 +00:00
grappa
hmmer
iolib	Fix typo in maintainer mail address	2010-08-02 16:06:38 +00:00
jalview
kinemage
L-Breeder	- update to 1.4.1	2010-03-28 06:47:48 +00:00
lagan
lamarc	- Update to 2.1.5	2010-08-04 06:30:07 +00:00
libgenome
libsbml	- Update to 4.1.0	2010-09-16 03:31:29 +00:00
linux-foldingathome
lsysexp	- update to 1.4.1	2010-03-28 06:47:48 +00:00
mafft
mapm3	- Mark MAKE_JOBS_UNSAFE	2009-11-20 22:53:09 +00:00
migrate	- Update MAINTAINER to submitters new mail address	2010-09-04 15:32:58 +00:00
molden
mopac	Autotools update. Read ports/UPDATING 20100915 for details.	2010-09-15 18:35:24 +00:00
mrbayes
mummer	- Update to 3.22	2010-03-21 17:18:20 +00:00
muscle
ncbi-toolkit	- use $SUB_FILES to dynamically adjust pkg-message	2010-01-31 03:42:20 +00:00
njplot
ortep3	For ports maintained by ports@FreeBSD.org, remove names and/or	2009-12-21 02:19:12 +00:00
p5-AcePerl	- Remove unneeded dependencies which is in perl-5.8.9 dist	2010-01-29 14:52:21 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das	Change dependency on old p5-Compress-Zlib, p5-IO-Compress-Base,	2010-09-21 07:56:43 +00:00
p5-Bio-Das-Lite	- Update to 2.04	2010-06-22 03:28:49 +00:00
p5-Bio-Glite	- Remove unneeded dependencies which is in perl-5.8.9 dist	2010-01-29 14:52:21 +00:00
p5-Bio-Graphics	- Update to 2.11	2010-06-30 07:41:06 +00:00
p5-Bio-MAGETAB	- Update to 1.13	2010-09-07 07:00:17 +00:00
p5-Bio-NEXUS	- Update to 0.75	2010-09-07 07:15:24 +00:00
p5-Bio-Phylo	- update to 1.4.1	2010-03-28 06:47:48 +00:00
p5-Bio-SCF	- Update to 1.03	2010-01-09 01:21:21 +00:00
p5-bioperl	- update to 1.4.1	2010-03-28 06:47:48 +00:00
p5-bioperl-run	- update to 1.4.1	2010-03-28 06:47:48 +00:00
paml	- Update to 4.4c	2010-09-08 00:16:45 +00:00
phd2fasta
phrap
phred
phylip	For ports maintained by ports@FreeBSD.org, remove names and/or	2009-12-21 02:19:12 +00:00
phyml
platon
povchem	- update to 1.4.1	2010-03-28 06:47:48 +00:00
primer3	- Update to 1.1.4	2009-12-18 02:55:57 +00:00
protomol	- update to 1.4.1	2010-03-28 06:47:48 +00:00
psi88
py-biopython	- Update to 1.54	2010-07-02 02:57:19 +00:00
pycogent	- Update to 1.4.1	2010-06-01 06:57:30 +00:00
pyfasta	- Update USE_PYTHON in Makefile to reflect upstream Python	2010-08-18 14:09:34 +00:00
pymol	Update to 1.3r1.3913.	2010-09-16 21:48:04 +00:00
python-nexus	- Update to 0.7	2010-02-24 01:30:46 +00:00
rasmol
recombine	For ports maintained by ports@FreeBSD.org, remove names and/or	2009-12-21 02:19:12 +00:00
ruby-bio	- Update to 1.4.0	2010-06-08 00:18:54 +00:00
seaview	- update to 1.4.1	2010-03-28 06:47:48 +00:00
seqio	For ports maintained by ports@FreeBSD.org, remove names and/or	2009-12-21 02:19:12 +00:00
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx	- update to 1.4.1	2010-03-28 06:47:48 +00:00
tRNAscan-SE
velvet
wise	- SBU_FILES += pkg-message	2010-01-08 01:30:20 +00:00
xdrawchem	- update to 1.4.1	2010-03-28 06:47:48 +00:00
xmolwt
Makefile	p5-Bio-Das-Lite is an implementation of a client for the DAS protocol (XML	2010-03-01 09:16:25 +00:00