…
..
patch-GlobalDefinitions.cpp
patch-GlobalDefinitions.h
patch-HashTable.cpp
patch-HashTableGeneric.cpp
patch-HashTablePacked.cpp
patch-HashTablePacked.h
patch-HashTableTranslated.cpp
patch-makefile
patch-MatchAligner.cpp
patch-MatchAligner.h
patch-MatchStore.h
patch-MatchStoreGapped.h
patch-MatchStoreUngapped.h
patch-QueryManager.cpp
patch-QueryManager.h
patch-README
patch-SequenceEncoder.cpp
patch-SequenceReader.cpp
patch-SequenceReader.h
patch-SequenceReaderFasta.cpp
patch-SequenceReaderFasta.h
patch-SequenceReaderFilter.h
patch-SequenceReaderLocal.cpp
patch-SequenceReaderMulti.cpp
patch-SequenceReaderMulti.h
patch-SequenceReaderString.h
patch-SSAHAMain.cpp
patch-SSAHAMain.h
patch-testHashTableNoOverlap.cpp
patch-testQueryManager.cpp
patch-testSequenceReaderFasta.cpp