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24815166c6
- Update MASTER_SITES and WWW: line - Support CXX/CXXFLAGS properly - Support PLIST_FILES - Stage support PR: 184852 Submitted by: Ports Fury
31 lines
1.1 KiB
Plaintext
31 lines
1.1 KiB
Plaintext
--- ./Binary/makefile.orig 2008-06-12 16:00:19.000000000 -0300
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+++ ./Binary/makefile 2008-06-12 16:00:43.000000000 -0300
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@@ -11,10 +11,10 @@
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# copy of the SSAHA directory structure you should be able to make files
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# straight away.
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#
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-# SSAHA_TOP_DIR=$(SSAHA_DIR?$(SSAHA_DIR):$(PWD)/../)
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+SSAHA_TOP_DIR=$(PWD)/../
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# Above is a nice idea, but syntax doesn't work for all versions of make
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# so must define CURRENT_SSAHA_VERSION, eg in your .cshrc file - TC 14.3.01
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-SSAHA_TOP_DIR=$(CURRENT_SSAHA_VERSION)
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+# SSAHA_TOP_DIR=$(CURRENT_SSAHA_VERSION)
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GLOBAL_DIR=${SSAHA_TOP_DIR}/Global
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SEQ_DIR=${SSAHA_TOP_DIR}/SequenceReader
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@@ -22,12 +22,12 @@
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QUERY_DIR=${SSAHA_TOP_DIR}/QueryManager
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EXEC_DIR=${SSAHA_TOP_DIR}/Executables
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-CCC = g++
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+CCC ?= g++
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# !!!! change -g to -O3 before making deliverable %%%%
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# NB use -ggdb to get gdb to work
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INCLUDE_PATHS = -I${SSAHA_TOP_DIR} \
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-I${GLOBAL_DIR} -I${SEQ_DIR} -I${HASH_DIR} -I${QUERY_DIR}
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-OPTIM = -O3
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+OPTIM ?= -O3
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DEBUG_LEVEL =
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# DEBUG_LEVEL = -DEBUG_LEVEL1
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# -D_REENTRANT necessary for thread safety - see pthread man page - TC 24.9.1
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