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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-20 04:02:27 +00:00
freebsd-ports/science
Dmitry Marakasov b02b01e211 - Fix build with clang by using std::vector instead of variable size array of non-POD type
- Fix build with PLOTUTILS enabled, which was broken when built with GCC
2014-09-04 18:43:58 +00:00
..
2d-rewriter
afni math/gsl: 2014-08-17 13:09:56 +00:00
avogadro Convert a bunch of USE_BZIP2 to USES=tar:bzip2 2014-07-29 18:41:15 +00:00
bddsolve
bft
bodr Convert a bunch of USE_BZIP2 to USES=tar:bzip2 2014-07-29 18:41:15 +00:00
brian
buddy
cdcl
cdf
cdo
cgnslib
cgribex
checkmol
chemical-mime-data
chemtool - Fix missing library problems when the linker enforces explicit linking 2014-08-26 14:06:08 +00:00
chemtool-devel - Fix missing library problems when the linker enforces explicit linking 2014-08-26 14:06:08 +00:00
clhep science/clhep: Upgrade version 2.2.0.1 => 2.2.0.3 2014-08-24 09:07:33 +00:00
colt
crf++
dcl
devisor
dlpoly-classic - Update net/openmpi from 1.8.1 to 1.8.2 2014-08-26 11:25:13 +00:00
ecs
elmer-eio
elmer-matc
elmer-meshgen2d
elmergrid
epte
fastcap Repair instances, almost all courtesy of bf ;-), of spaces 2014-07-29 20:55:27 +00:00
fasthenry Support stage 2014-08-29 18:33:30 +00:00
fisicalab math/gsl: 2014-08-17 13:09:56 +00:00
fvcom - Update to 4.4.0 2014-08-15 21:08:21 +00:00
fvcom-mpi - Update net/openmpi from 1.8.1 to 1.8.2 2014-08-26 11:25:13 +00:00
fvm - Upgrade to 1.5; 2014-09-01 21:50:14 +00:00
gchemutils
getdp math/gsl: 2014-08-17 13:09:56 +00:00
ghemical - Stagify 2014-08-06 16:05:23 +00:00
ghmm
gnudatalanguage Update CMake to 3.0.1. 2014-09-02 12:59:54 +00:00
gramps Berkeley DB cleanup, remove versions 4.0 ... 4.7. 2014-08-21 22:50:29 +00:00
grib_api - Add grib_api 1.12.3 2014-08-29 17:31:42 +00:00
gromacs - Upgrade to 1.5; 2014-09-01 21:50:14 +00:00
gsmc - Fix missing library problems when the linker enforces explicit linking 2014-08-26 14:06:08 +00:00
gtamsanalyzer Bump PORTREVISION on more ports that depend on libgcrypt after the update 2014-08-05 22:13:29 +00:00
gwyddion math/fftw3: 2014-08-31 16:36:22 +00:00
h5utils
harminv lang/guile: 2014-08-31 15:17:49 +00:00
hdf
hdf5
hdf-java
hs-bio - Update The Glorious Glasgow Haskell Compiler to version 7.8.3 2014-08-10 22:34:50 +00:00
InsightToolkit
isaac-cfd
jmol
jstrack Mark BROKEN: Checksum and size mismatch 2014-08-01 17:26:45 +00:00
kalzium Upgrade OpenEXR and ilmbase to 2.2.0. 2014-08-15 20:37:31 +00:00
kst2 math/gsl: 2014-08-17 13:09:56 +00:00
lamprop science/lamprop: switch to USES=python 2014-08-16 11:42:41 +00:00
libctl lang/guile: 2014-08-31 15:17:49 +00:00
libghemical - Switch to USES=libtool, drop .la files 2014-08-06 16:06:22 +00:00
libint - Stagify 2014-08-06 16:06:55 +00:00
libkml
liblinear
liboglappth
libquantum
libsvm
libsvm-python
linsmith
massxpert
mbdyn Update to 1.4.3 2014-08-29 18:43:03 +00:00
medit - Fix missing library problems when the linker enforces explicit linking 2014-08-26 14:06:08 +00:00
meep lang/guile: 2014-08-31 15:17:49 +00:00
mei
metaf2xml
minc2 science/minc2: Unbreak, Upgrade version 2.0.18 => 2.2.00 and stage 2014-07-29 21:33:51 +00:00
mol2ps
mpb lang/guile: 2014-08-31 15:17:49 +00:00
mpqc Chase the upgrade of net/mpich2. 2014-08-26 19:55:00 +00:00
mpqc-mpich
ncs - Upgrade to 1.5; 2014-09-01 21:50:14 +00:00
netcdf
netcdf-cxx - Use USE_GITHUB 2014-08-15 17:27:48 +00:00
netcdf-fortran - Cleanup Makefile 2014-08-17 09:56:47 +00:00
nifticlib
openbabel
openkim Convert a bunch of EXTRACT_SUFX=... into USES=tar:... 2014-07-29 19:11:51 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-PerlMol
p5-Physics-Unit
paje Bump PORTREVISION on more ports that depend on libgcrypt after the update 2014-08-05 22:13:29 +00:00
paraview science/paraview: alternative fix with USES+= execinfo instead 2014-09-01 19:53:11 +00:00
pnetcdf - Upgrade to 1.5; 2014-09-01 21:50:14 +00:00
psychopy
pulseview science/pulseview: Remove unnecessary RUN_DEPENDS 2014-08-03 16:16:21 +00:00
py-coards
py-DendroPy
py-h5py
py-hcluster
py-mdp
py-mlpy math/gsl: 2014-08-17 13:09:56 +00:00
py-netCDF4
py-obspy
py-paida science/py-paida: support stage 2014-08-05 13:22:35 +00:00
py-pupynere
py-pyaixi
py-pydap
py-pydicom
py-pysal - Add py-pysal 1.8.0 2014-09-04 16:24:31 +00:00
py-scikit-learn
py-scimath
py-scipy - Enable concurrent installation support for different python versions 2014-09-02 19:00:27 +00:00
py-ws2300
pybrain
pycdf science/pycdf: support stage and use auto plist 2014-08-05 13:27:44 +00:00
pynn
pyteomics
pyteomics.biolccc
qcl - Fix build with clang by using std::vector instead of variable size array of non-POD type 2014-09-04 18:43:58 +00:00
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-snow
R-cran-som
ruby-dcl science/ruby-dcl: fixed broken; use gcc 2014-08-21 20:29:20 +00:00
ruby-gphys many ruby/rubygem ports: death of rubyforge.org 2014-08-19 15:35:35 +00:00
ruby-netcdf many ruby/rubygem ports: death of rubyforge.org 2014-08-19 15:35:35 +00:00
rubygem-ai4r science/rubygem-ai4r: update to 1.13 2014-08-23 21:52:50 +00:00
rubygem-netcdf
sigrok-cli
sigrok-firmware Add new port: science/sigrok-firmware 2014-08-03 22:37:51 +00:00
sigrok-firmware-fx2lafw Add new port: science/sigrok-firmware-fx2lafw 2014-08-03 22:24:50 +00:00
sigrok-firmware-utils Add new port: science/sigrok-firmware-utils 2014-08-03 22:09:07 +00:00
silo
simlib
simsmith
step math/gsl: 2014-08-17 13:09:56 +00:00
svmlight In some straightforward cases, protect documentation behind 2014-08-04 03:40:14 +00:00
szip
udunits - Update to 2.2.17 2014-09-03 19:09:22 +00:00
v_sim
veusz
vmd Stage science/vmd 2014-08-30 14:17:53 +00:00
voro++
xfce4-equake-plugin
xmakemol
Makefile - Add py-pysal 1.8.0 2014-09-04 16:24:31 +00:00