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Code Issues Releases Activity
freebsd-ports/biology
History
Dirk Meyer 10f3be8676 - update PORTSCOUT
2009-02-15 16:45:58 +00:00
..
adun
- update PORTSCOUT
2009-02-15 16:45:58 +00:00
ariadne
…
artemis
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
avida
- Update to 2.8.1
2008-10-23 14:13:37 +00:00
babel
…
belvu
…
biococoa
- add LICENSE:
2009-01-16 16:01:05 +00:00
biojava
Reset nemoliu due to maintainer-timeouts and no response to email.
2008-12-08 06:43:50 +00:00
blast
- Remove conditional checks relevant only on FreeBSD 5.x and older
2009-01-05 17:27:29 +00:00
blat
- Remove USE_GCC where it can be satisfied with base compiler on following
2008-07-25 14:34:52 +00:00
boinc-simap
- Remove conditional checks relevant only on FreeBSD 5.x and older
2009-01-05 17:27:29 +00:00
chemeq
…
clustalw
- Update to 2.0.6
2008-04-29 12:58:52 +00:00
consed
Teach the building cluster that these ports are not to be build
2008-05-25 23:05:10 +00:00
crimap
…
distribfold
…
dna-qc
…
dotter
Umark BROKEN, stale distfile removed from ftp-master.
2008-01-27 11:26:35 +00:00
embassy
- Update to 5.0.0
2008-04-13 07:22:42 +00:00
emboss
- Replace SF with second working master site
2008-04-17 17:06:48 +00:00
fasta
- Update download location
2009-01-31 22:45:38 +00:00
fasta3
- Update to 35.3.6
2008-04-10 08:09:10 +00:00
fastdnaml
…
finchtv
…
fluctuate
…
garlic
- Remove unneeded dependency from gtk12/gtk20 [1]
2008-04-19 17:56:05 +00:00
genpak
- Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default MAKE_ENV
2008-07-25 09:08:42 +00:00
gff2ps
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
gmap
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
2008-08-21 06:18:49 +00:00
gperiodic
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
grappa
…
hmmer
- Update download locations, update WWW
2009-02-01 08:17:14 +00:00
jalview
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
kinemage
- Remove unneeded dependency from gtk12/gtk20 [1]
2008-04-19 17:56:05 +00:00
L-Breeder
Reset dyeske@gmail.com at his request.
2009-02-02 23:44:01 +00:00
lagan
- Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default MAKE_ENV
2008-07-25 09:08:42 +00:00
lamarc
- Update to 2.1.3
2008-07-31 16:18:42 +00:00
libgenome
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
2008-08-21 06:18:49 +00:00
linux-foldingathome
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lsysexp
Reset dyeske@gmail.com at his request.
2009-02-02 23:44:01 +00:00
mafft
- Update download locations, update WWW
2009-02-04 03:31:00 +00:00
mapm3
MAPMAKER/EXP is a linkage analysis package designed to help construct primary
2008-04-06 04:49:05 +00:00
migrate
- Update to 3.0.3
2009-01-14 16:00:34 +00:00
molden
- Unbreak distinfo after portrevision bump
2009-01-09 19:31:49 +00:00
mopac
Add -lf2c, this is the correct dependency. Bump portrevision.
2008-08-22 22:20:05 +00:00
mrbayes
- Update maintainer's email address
2008-05-17 16:52:34 +00:00
mummer
MUMmer is a modular system for the rapid whole genome alignment of finished
2007-12-14 20:54:47 +00:00
muscle
- Update maintainer's email address
2008-05-17 16:52:34 +00:00
ncbi-toolkit
- Remove unneeded dependency from gtk12/gtk20 [1]
2008-04-19 17:56:05 +00:00
njplot
- Update maintainer's email address
2008-05-17 16:52:34 +00:00
ortep3
Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3.
2009-01-07 16:34:27 +00:00
p5-AcePerl
- Remove conditional checks relevant only on FreeBSD 5.x and older
2009-01-05 17:27:29 +00:00
p5-Bio-ASN1-EntrezGene
- Take advantage of CPAN macro from bsd.sites.mk, change ${MASTER_SITE_PERL_CPAN} to CPAN.
2008-04-17 14:30:31 +00:00
p5-Bio-Das
- update to 1.10
2008-12-11 05:19:12 +00:00
p5-Bio-Phylo
Reset aaron's port maintainerships due to many maintainer-timeouts.
2008-04-29 05:27:09 +00:00
p5-bioperl
Fix plist with perl 5.8.9.
2009-01-14 15:10:02 +00:00
p5-bioperl-devel
- Unbreak
2008-10-21 15:24:46 +00:00
p5-bioperl-run
- Unbreak after p5-bioperl changed portrevision
2009-01-15 22:47:02 +00:00
p5-bioperl-run-devel
- Mark as broken
2008-12-16 16:13:11 +00:00
paml
- Update to 4.2
2008-12-25 19:56:07 +00:00
phd2fasta
Teach the building cluster that these ports are not to be build
2008-05-25 23:05:10 +00:00
phrap
Teach the building cluster that these ports are not to be build
2008-05-25 23:05:10 +00:00
phred
Teach the building cluster that these ports are not to be build
2008-05-25 23:05:10 +00:00
phylip
- Update X.org ports to 7.4+ (few ports are more recent than the katamari).
2009-01-23 16:28:36 +00:00
platon
Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3.
2009-01-07 16:34:27 +00:00
povchem
…
primer3
- Update to 1.1.3
2008-04-04 20:46:35 +00:00
protomol
- Update X.org ports to 7.4+ (few ports are more recent than the katamari).
2009-01-23 16:28:36 +00:00
psi88
Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3.
2009-01-07 16:34:27 +00:00
py-biopython
- Update to 1.48
2008-10-11 15:26:33 +00:00
pymol
- Update X.org ports to 7.4+ (few ports are more recent than the katamari).
2009-01-23 16:28:36 +00:00
rasmol
- Remove unneeded dependency from gtk12/gtk20 [1]
2008-04-19 17:56:05 +00:00
recombine
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ruby-bio
- Update to 1.1.0
2007-10-24 01:38:51 +00:00
seaview
- Remove unneeded dependency from gtk12/gtk20 [1]
2008-04-19 17:56:05 +00:00
seqio
- respect NOPORTEXAMPLES/NOPORTDOCS and fix plist
2008-07-12 06:28:25 +00:00
sim4
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ssaha
- Fix plist files installation.
2008-06-21 02:46:21 +00:00
t_coffee
- Respect PORTDOCS/PORTEXAMPLES
2008-09-09 13:43:15 +00:00
tinker
Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3.
2009-01-07 16:34:27 +00:00
treepuzzle
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
2008-08-21 06:18:49 +00:00
treeviewx
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
tRNAscan-SE
- Update MASTER_SITES and WWW: line
2008-05-22 00:49:42 +00:00
wise
…
xdrawchem
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
2008-08-21 06:18:49 +00:00
xmolwt
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
Makefile
- Delete biology/nab port after being marked DEPRECATED for three months
2008-07-24 12:17:12 +00:00