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freebsd-ports/biology
History
Wesley Shields a8dc52d3dc - Roll back to 4.6 as 4.7 is the development version and is constantly being 
re-rolled.
- Move post-patch target into files/patch-xwin.c to remove sed invocation.
- Respect NOPORTDATA and DATADIR.
- Bring files/patch-aa back (to preserve history) and retire patch-makefile.
- Fixup files/patch-xwin.c so it applies cleanly to this version.
2008-11-11 02:21:28 +00:00
..
adun
- update PORTSCOUT
2008-08-12 17:13:44 +00:00
ariadne
…
artemis
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
avida
- Update to 2.8.1
2008-10-23 14:13:37 +00:00
babel
…
belvu
…
biococoa
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
biojava
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
blast
…
blat
- Remove USE_GCC where it can be satisfied with base compiler on following
2008-07-25 14:34:52 +00:00
boinc-simap
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
chemeq
…
clustalw
- Update to 2.0.6
2008-04-29 12:58:52 +00:00
consed
Teach the building cluster that these ports are not to be build
2008-05-25 23:05:10 +00:00
crimap
…
distribfold
…
dna-qc
…
dotter
…
embassy
…
emboss
…
fasta
…
fasta3
…
fastdnaml
…
finchtv
…
fluctuate
…
garlic
…
genpak
- Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default MAKE_ENV
2008-07-25 09:08:42 +00:00
gff2ps
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
gmap
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
2008-08-21 06:18:49 +00:00
gperiodic
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
grappa
…
hmmer
…
jalview
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
kinemage
…
L-Breeder
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
lagan
- Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default MAKE_ENV
2008-07-25 09:08:42 +00:00
lamarc
- Update to 2.1.3
2008-07-31 16:18:42 +00:00
libgenome
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
2008-08-21 06:18:49 +00:00
linux-foldingathome
…
lsysexp
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
mafft
…
mapm3
…
migrate
…
molden
- Roll back to 4.6 as 4.7 is the development version and is constantly being
2008-11-11 02:21:28 +00:00
mopac
Add -lf2c, this is the correct dependency. Bump portrevision.
2008-08-22 22:20:05 +00:00
mrbayes
- Update maintainer's email address
2008-05-17 16:52:34 +00:00
mummer
…
muscle
- Update maintainer's email address
2008-05-17 16:52:34 +00:00
ncbi-toolkit
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njplot
- Update maintainer's email address
2008-05-17 16:52:34 +00:00
ortep3
…
p5-AcePerl
Update my ports to my freebsd address
2008-07-23 02:43:55 +00:00
p5-Bio-ASN1-EntrezGene
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p5-Bio-Das
- Update to 1.09
2008-05-31 13:46:14 +00:00
p5-Bio-Phylo
…
p5-bioperl
…
p5-bioperl-devel
- Unbreak
2008-10-21 15:24:46 +00:00
p5-bioperl-run
…
p5-bioperl-run-devel
…
paml
- Update to 4.1
2008-09-30 08:54:55 +00:00
phd2fasta
Teach the building cluster that these ports are not to be build
2008-05-25 23:05:10 +00:00
phrap
Teach the building cluster that these ports are not to be build
2008-05-25 23:05:10 +00:00
phred
Teach the building cluster that these ports are not to be build
2008-05-25 23:05:10 +00:00
phylip
- Fix build
2008-08-27 16:21:06 +00:00
platon
…
povchem
…
primer3
…
protomol
- Remove USE_GCC where it can be satisfied with base compiler on following
2008-07-25 14:34:52 +00:00
psi88
…
py-biopython
- Update to 1.48
2008-10-11 15:26:33 +00:00
pymol
…
rasmol
…
recombine
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ruby-bio
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seaview
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seqio
- respect NOPORTEXAMPLES/NOPORTDOCS and fix plist
2008-07-12 06:28:25 +00:00
sim4
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ssaha
- Fix plist files installation.
2008-06-21 02:46:21 +00:00
t_coffee
- Respect PORTDOCS/PORTEXAMPLES
2008-09-09 13:43:15 +00:00
tinker
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treepuzzle
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
2008-08-21 06:18:49 +00:00
treeviewx
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
tRNAscan-SE
- Update MASTER_SITES and WWW: line
2008-05-22 00:49:42 +00:00
wise
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xdrawchem
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
2008-08-21 06:18:49 +00:00
xmolwt
Bump portrevision due to upgrade of devel/gettext.
2008-06-06 13:08:29 +00:00
Makefile
- Delete biology/nab port after being marked DEPRECATED for three months
2008-07-24 12:17:12 +00:00