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39 Commits

Author SHA1 Message Date
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Mathieu Arnold
4819ca343b - Convert to new perl framework 
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default.
 2013-08-02 18:52:07 +00:00
Wen Heping
881d1953d7 - Update to 0.56 2013-07-20 10:04:32 +00:00
Frederic Culot
417a7b673b - Update to 0.52 [1] 
- Capitalize names (Perl) in COMMENT

PR:		ports/176003 [1]
Submitted by:	Gea-Suan Lin <gslin@gslin.org>
 2013-02-16 14:58:51 +00:00
Sunpoet Po-Chuan Hsieh
8825b172e2 - Update to 0.50 
- Add TEST_DEPENDS
- Sort PLIST
 2012-06-12 18:55:28 +00:00
Sunpoet Po-Chuan Hsieh
eb45489616 - Update to 0.49 2012-06-03 15:12:49 +00:00
Dirk Meyer
2b74a89bc8 - update png to 1.5.10 2012-06-01 05:26:28 +00:00
Sunpoet Po-Chuan Hsieh
b9d8e487cc - Update to 0.48 
- Add BUILD_DEPENDS
 2012-05-03 09:48:21 +00:00
Wen Heping
6058b2661d - Update to 0.47 2012-04-11 01:34:57 +00:00
Wen Heping
6571b7f059 - Update to 0.46 2012-03-05 08:22:46 +00:00
Sunpoet Po-Chuan Hsieh
453389fd26 - Update to 0.45 2011-10-29 06:20:45 +00:00
Sunpoet Po-Chuan Hsieh
80331d2a02 - Update to 0.43 2011-10-17 01:38:22 +00:00
Frederic Culot
02ce43955f - Update to 0.40 
- Add LICENSE (Artistic 1 & GPLv1)
 2011-08-09 18:26:45 +00:00
Sunpoet Po-Chuan Hsieh
1abb4c4130 - Update to 0.39 2011-08-01 03:11:37 +00:00
Sunpoet Po-Chuan Hsieh
44e3305c58 - Update to 0.38 
- Sort MAN3 and PLIST
 2011-07-16 06:08:34 +00:00
Wen Heping
6edfd6fb2e - Update to 0.36 2011-04-01 08:34:03 +00:00
Wen Heping
34ffacfa25 - Update to 0.35 2011-02-28 01:30:15 +00:00
Wen Heping
44a8e2746c - Update to 0.34 2010-12-23 06:33:33 +00:00
Wen Heping
0c58bca1ec - Update to 0.33 2010-12-16 08:19:56 +00:00
Philip M. Gollucci
7823a28b14 - Update to 0.32 
With Hat:       perl@
Changes:        http://search.cpan.org/dist/Bio-Phylo/Changes
 2010-12-12 21:29:40 +00:00
Wen Heping
fabc490448 - Update to 0.31 2010-11-22 08:50:39 +00:00
Wen Heping
4cfe377eb9 - Update to 0.30 
PR:		ports/152205
Submitted by:	Gea-Suan Lin <gslin@gslin.org>
 2010-11-17 06:24:38 +00:00
Philippe Audeoud
3ccd369106 - Update to 0.28 2010-11-09 14:15:44 +00:00
Wen Heping
8d82354698 - Update to 0.26 
- Reset maintainer to perl@
 2010-10-25 10:59:25 +00:00
Wen Heping
67d49aa254 - Update to 0.22 2010-10-22 09:29:44 +00:00
Dirk Meyer
de78af3ac5 - update to 1.4.1 
Reviewed by:	exp8 run on pointyhat
Supported by:	miwi
 2010-03-28 06:47:48 +00:00
Wen Heping
d3c411d05d - Update to 0.21 2010-03-09 07:34:48 +00:00
Wen Heping
22c4a3da76 - Update to 0.18 
- Adopt

Feature safe:	yes
 2010-03-03 13:44:19 +00:00
Dirk Meyer
ca9c60461c - update to jpeg-8 2010-02-05 11:46:55 +00:00
Dirk Meyer
eca78ec61b - bump all port that indirectly depends on libjpeg and have not yet been bumped or updated 
Requested by:	edwin
 2009-07-31 13:57:52 +00:00
Mark Linimon
e3e5d56ef1 Reset aaron's port maintainerships due to many maintainer-timeouts. 2008-04-29 05:27:09 +00:00
Marcelo Araujo
4aaab89f57 - Take advantage of CPAN macro from bsd.sites.mk, change ${MASTER_SITE_PERL_CPAN} to CPAN. 
PR:		ports/122674
Submitted by:	Philip M. Gollucci <pgollucci@p6m7g8.com>
Reworked by:	araujo (myself)
Approved by:	portmgr (pav)
 2008-04-17 14:30:31 +00:00
Mark Linimon
9839011ec3 Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+. 
Drop support for antique perl.

Work done by:	gabor
Sponsored by:	Google Summer of Code 2007
Hat:		portmgr
 2007-09-08 01:12:10 +00:00
Aaron Dalton
9cec3ba81e Bump to v0.16. 
PR:		111719
Submitted by:	araujo@bsdmail.org
 2007-06-19 20:15:58 +00:00
Florent Thoumie
d4f0d0048a - Welcome X.org 7.2 \o/. 
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
 2007-05-19 20:36:56 +00:00
Aaron Dalton
dda8ae5412 Update to v0.15 2006-12-27 18:58:26 +00:00
Frank J. Laszlo
4ffcd931fe - Update to 0.14 
Submitted by:	Jin-Shan Tseng <tjs@cdpa.nsysu.edu.tw>
Approved by:	maintainer timeout (3 months)
 2006-12-07 15:43:27 +00:00
Aaron Dalton
e25d96e450 - Updated from 0.07 to 0.12 
Approved by:	tobez (implicit)

0.08 20/Feb/2006 15:14
                       Improved referential integrity between nodes,
                                taxa, and data.
                       Implemented Fastnexus parser
                       Node object silently implements Bio::Tree::NodeI
                       		interface if BioPerl is installed
                       Tree object silently implements Bio::Tree::TreeI
                       		interface if BioPerl is installed
                       Added convertor methods for XML and CIPRES
                       Implemented more Matrix methods
                       Implemented symbol tables in Bio::Phylo::Util::CONSTANT
                       Implemented visit method for listable objects
                       Implemented caching infrastructure for calculations
                       Changed object-model to inside-out arrays
                       Added Biodiversity measures code by Aki Mimoto
                       Moved constants and exceptions to Bio::Phylo::Util::*
                       Fixed memory leak due to circular references
 2006-05-19 23:18:32 +00:00
Aaron Dalton
29ad3c789c Adding port biology/p5-Bio-Phylo, Phylogenetic analysis using perl. 
Approved by:	tobez (implicit)
 2006-05-13 16:48:15 +00:00