| .. |
|
artemis
|
Initial import of artemis 4.0
|
2001-12-22 14:39:40 +00:00 |
|
avida
|
BROKEN: Does not build
|
2002-09-19 02:45:38 +00:00 |
|
babel
|
* Replace pkg-message about setting BABEL_DIR with a wrapper script
|
2001-12-02 13:09:47 +00:00 |
|
biojava
|
Unbreak this port:
|
2002-06-16 01:08:49 +00:00 |
|
chemeq
|
upgrade to V110-1
|
2002-04-21 13:33:29 +00:00 |
|
clustalw
|
- Add a new patch
|
2002-03-27 14:01:57 +00:00 |
|
coalesce
|
Add coalesce 1.50, a program to fit population models.
|
2001-08-06 14:41:58 +00:00 |
|
crimap
|
Add crimap 2.4, a tool for the creation of multilocus linkage maps.
|
2002-03-27 14:42:56 +00:00 |
|
deft
|
change master site
|
2002-03-29 08:15:13 +00:00 |
|
dna-qc
|
Add dna-qc 1993.07.26, a quality control algorithm for DNA
|
2001-12-19 03:20:48 +00:00 |
|
emboss
|
- Update to version 2.4.1
|
2002-07-05 10:09:32 +00:00 |
|
fasta
|
Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.
|
2001-07-03 09:08:26 +00:00 |
|
fasta3
|
Prefer <limits.h> over <values.h> as the latter has been removed from
|
2002-08-23 03:36:33 +00:00 |
|
fastdnaml
|
Add NOPORTDOCS support to pkg-plist
|
2001-07-08 18:15:34 +00:00 |
|
flip
|
Flip is used to find/translate orfs.
|
2002-09-10 14:04:06 +00:00 |
|
fluctuate
|
Add fluctuate 1.30, a program to fit population models.
|
2001-08-06 14:45:39 +00:00 |
|
gaussian98
|
Remove USE_NEWGCC, which is no longer supported or required.
|
2002-08-31 02:38:29 +00:00 |
|
genpak
|
Bump png major
|
2001-09-11 03:32:41 +00:00 |
|
gff2ps
|
- Install documentation
|
2002-02-13 02:54:31 +00:00 |
|
gperiodic
|
Deploy USE_GNOMENG infrastructure
|
2002-08-30 12:59:40 +00:00 |
|
grappa
|
- Update to version 1.0.3
|
2001-08-29 11:53:29 +00:00 |
|
hmmer
|
- Add patch that will, for -CURRENT only, change: -pthread -> -lc_r
|
2002-07-11 10:52:14 +00:00 |
|
kinemage
|
Update to version 5.79.
|
2000-12-11 03:10:04 +00:00 |
|
L-Breeder
|
New port L-Breeder version 1.0: Allows you to display and breed
|
2002-08-21 00:01:59 +00:00 |
|
lamarc
|
Add lamarc 2001.08.06,
|
2001-08-07 08:17:58 +00:00 |
|
libgenome
|
- Support CXXFLAGS properly.
|
2002-08-17 19:16:55 +00:00 |
|
migrate
|
- Update to version 1.2.4
|
2001-08-22 14:43:45 +00:00 |
|
molden
|
Note distribution term.
|
2002-05-27 06:25:53 +00:00 |
|
mopac
|
Add NOPORTDOCS support to pkg-plist
|
2001-07-08 18:15:34 +00:00 |
|
nab
|
upgrade to 4.4
|
2002-07-16 06:18:16 +00:00 |
|
ncbi-toolkit
|
Correct MASTER_SITES.
|
2002-06-08 00:40:10 +00:00 |
|
nclever
|
Add nclever 4.0, a character-based version of NCBI's Entrez program.
|
2001-09-26 09:22:02 +00:00 |
|
ortep3
|
|
|
|
p5-AcePerl
|
- Update to version 1.82
|
2002-01-25 12:35:20 +00:00 |
|
p5-bioperl
|
- Update to version 0.7.2, somewhat overdue. :-)
|
2002-01-25 11:46:09 +00:00 |
|
p5-bioperl-devel
|
- Add NO_LATEST_LINK, which should've been there in the first place. :-(
|
2001-09-20 15:11:14 +00:00 |
|
paml
|
- Update to version 3.1
|
2001-08-29 12:00:08 +00:00 |
|
phylip
|
Update to version 3.6.a3.
|
2002-08-13 16:07:45 +00:00 |
|
pkg
|
|
|
|
platon
|
add USE_XLIB
|
2001-07-30 21:05:54 +00:00 |
|
povchem
|
Clean up inefficient perl invocations; use multiple REs in the same call.
|
2001-01-07 17:49:52 +00:00 |
|
primer3
|
add primer3 0.9
|
2002-09-17 15:31:09 +00:00 |
|
psi88
|
update WWW and master site
|
2001-10-22 06:36:14 +00:00 |
|
py-biopython
|
Use $PYNUMERIC in the dependencies.
|
2002-07-15 11:37:35 +00:00 |
|
pymol
|
o Fix examples directory path which is changed in last revision.
|
2002-08-26 05:13:28 +00:00 |
|
rasmol
|
Fix WWW.
|
2002-03-08 20:50:08 +00:00 |
|
recombine
|
Add recombine 1.40, a program to fit population models across sites.
|
2001-08-06 14:49:53 +00:00 |
|
ruby-bio
|
Update to 0.3.9.
|
2002-08-03 07:02:10 +00:00 |
|
seaview
|
Bump XForms lib. version.
|
2002-07-04 09:20:30 +00:00 |
|
seqio
|
Remove a redundant trailing space.
|
2001-10-21 07:55:45 +00:00 |
|
sim4
|
Update to sim4-2002.03.03 to unbreak build.
|
2002-05-04 21:45:10 +00:00 |
|
spdbv
|
Swiss-PdbViewer is an application that provides a user friendly interface
|
2002-04-02 16:18:53 +00:00 |
|
t_coffee
|
Add t_coffee 1.37, a multiple DNA or protein sequence alignment package.
|
2002-01-25 14:58:16 +00:00 |
|
tinker
|
Upgrade tinker to the latest revision
|
2002-01-19 15:15:16 +00:00 |
|
treeviewx
|
Chase new name of wxgtk shared library.
|
2002-09-09 14:21:08 +00:00 |
|
tRNAscan-SE
|
Add tRNAscan-SE 1.21, an improved tool for transfer RNA detection.
|
2002-03-27 14:18:49 +00:00 |
|
wise
|
"Wise2 is package that is focused on comparing DNA sequences at
|
2002-09-10 13:58:40 +00:00 |
|
xdrawchem
|
Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command;
|
2002-01-29 09:39:59 +00:00 |
|
xmolwt
|
Deploy USE_GNOMENG infrastructure
|
2002-08-30 12:59:40 +00:00 |
|
Makefile
|
add primer3 0.9
|
2002-09-17 15:31:09 +00:00 |
