Kris Kennaway 8fa8041fe5 Remove USE_NEWGCC, which is no longer supported or required. ...

Submitted by:	Tilman Linneweh <tilman@arved.de>
PR:		ports/40571

2002-08-31 02:38:29 +00:00

..

artemis

Initial import of artemis 4.0

2001-12-22 14:39:40 +00:00

avida

add avida 1.6.0

2002-04-20 15:17:46 +00:00

babel

* Replace pkg-message about setting BABEL_DIR with a wrapper script

2001-12-02 13:09:47 +00:00

biojava

Unbreak this port:

2002-06-16 01:08:49 +00:00

chemeq

upgrade to V110-1

2002-04-21 13:33:29 +00:00

clustalw

- Add a new patch

2002-03-27 14:01:57 +00:00

coalesce

Add coalesce 1.50, a program to fit population models.

2001-08-06 14:41:58 +00:00

crimap

Add crimap 2.4, a tool for the creation of multilocus linkage maps.

2002-03-27 14:42:56 +00:00

deft

change master site

2002-03-29 08:15:13 +00:00

dna-qc

Add dna-qc 1993.07.26, a quality control algorithm for DNA

2001-12-19 03:20:48 +00:00

emboss

- Update to version 2.4.1

2002-07-05 10:09:32 +00:00

fasta

Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.

2001-07-03 09:08:26 +00:00

fasta3

Prefer <limits.h> over <values.h> as the latter has been removed from

2002-08-23 03:36:33 +00:00

fastdnaml

Add NOPORTDOCS support to pkg-plist

2001-07-08 18:15:34 +00:00

fluctuate

Add fluctuate 1.30, a program to fit population models.

2001-08-06 14:45:39 +00:00

gaussian98

Remove USE_NEWGCC, which is no longer supported or required.

2002-08-31 02:38:29 +00:00

genpak

Bump png major

2001-09-11 03:32:41 +00:00

gff2ps

- Install documentation

2002-02-13 02:54:31 +00:00

gperiodic

Deploy USE_GNOMENG infrastructure

2002-08-30 12:59:40 +00:00

grappa

- Update to version 1.0.3

2001-08-29 11:53:29 +00:00

hmmer

- Add patch that will, for -CURRENT only, change: -pthread -> -lc_r

2002-07-11 10:52:14 +00:00

kinemage

Update to version 5.79.

2000-12-11 03:10:04 +00:00

L-Breeder

New port L-Breeder version 1.0: Allows you to display and breed

2002-08-21 00:01:59 +00:00

lamarc

Add lamarc 2001.08.06,

2001-08-07 08:17:58 +00:00

libgenome

- Support CXXFLAGS properly.

2002-08-17 19:16:55 +00:00

migrate

- Update to version 1.2.4

2001-08-22 14:43:45 +00:00

molden

Note distribution term.

2002-05-27 06:25:53 +00:00

mopac

Add NOPORTDOCS support to pkg-plist

2001-07-08 18:15:34 +00:00

nab

upgrade to 4.4

2002-07-16 06:18:16 +00:00

ncbi-toolkit

Correct MASTER_SITES.

2002-06-08 00:40:10 +00:00

nclever

Add nclever 4.0, a character-based version of NCBI's Entrez program.

2001-09-26 09:22:02 +00:00

ortep3

File missing in pkg-plist

2000-10-30 15:36:57 +00:00

p5-AcePerl

- Update to version 1.82

2002-01-25 12:35:20 +00:00

p5-bioperl

- Update to version 0.7.2, somewhat overdue. :-)

2002-01-25 11:46:09 +00:00

p5-bioperl-devel

- Add NO_LATEST_LINK, which should've been there in the first place. :-(

2001-09-20 15:11:14 +00:00

paml

- Update to version 3.1

2001-08-29 12:00:08 +00:00

phylip

Update to version 3.6.a3.

2002-08-13 16:07:45 +00:00

pkg

…

platon

add USE_XLIB

2001-07-30 21:05:54 +00:00

povchem

Clean up inefficient perl invocations; use multiple REs in the same call.

2001-01-07 17:49:52 +00:00

psi88

update WWW and master site

2001-10-22 06:36:14 +00:00

py-biopython

Use $PYNUMERIC in the dependencies.

2002-07-15 11:37:35 +00:00

pymol

o Fix examples directory path which is changed in last revision.

2002-08-26 05:13:28 +00:00

rasmol

Fix WWW.

2002-03-08 20:50:08 +00:00

recombine

Add recombine 1.40, a program to fit population models across sites.

2001-08-06 14:49:53 +00:00

ruby-bio

Update to 0.3.9.

2002-08-03 07:02:10 +00:00

seaview

Bump XForms lib. version.

2002-07-04 09:20:30 +00:00

seqio

Remove a redundant trailing space.

2001-10-21 07:55:45 +00:00

sim4

Update to sim4-2002.03.03 to unbreak build.

2002-05-04 21:45:10 +00:00

spdbv

Swiss-PdbViewer is an application that provides a user friendly interface

2002-04-02 16:18:53 +00:00

t_coffee

Add t_coffee 1.37, a multiple DNA or protein sequence alignment package.

2002-01-25 14:58:16 +00:00

tinker

Upgrade tinker to the latest revision

2002-01-19 15:15:16 +00:00

treeviewx

Respect CFLAGS/CC.

2002-03-28 22:50:15 +00:00

tRNAscan-SE

Add tRNAscan-SE 1.21, an improved tool for transfer RNA detection.

2002-03-27 14:18:49 +00:00

xdrawchem

Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command;

2002-01-29 09:39:59 +00:00

xmolwt

Deploy USE_GNOMENG infrastructure

2002-08-30 12:59:40 +00:00

Makefile

New port L-Breeder version 1.0: Allows you to display and breed

2002-08-21 00:01:59 +00:00