Tom Hukins 2284d53b36 Update CATEGORIES as per ports/44331. ... While I'm here, remove unnecessary whitespace spotted by portlint. PR: ports/44331 Submitted by: Martin Klaffenboeck <martin.klaffenboeck@gmx.at>		2002-10-21 10:59:11 +00:00
..
artemis	Initial import of artemis 4.0	2001-12-22 14:39:40 +00:00
avida	BROKEN: Does not build	2002-09-19 02:45:38 +00:00
babel	* Replace pkg-message about setting BABEL_DIR with a wrapper script	2001-12-02 13:09:47 +00:00
biojava	Unbreak this port:	2002-06-16 01:08:49 +00:00
chemeq	upgrade to V110-1	2002-04-21 13:33:29 +00:00
clustalw	- Add a new patch	2002-03-27 14:01:57 +00:00
coalesce	Add coalesce 1.50, a program to fit population models.	2001-08-06 14:41:58 +00:00
crimap	Add crimap 2.4, a tool for the creation of multilocus linkage maps.	2002-03-27 14:42:56 +00:00
deft	change master site	2002-03-29 08:15:13 +00:00
distribfold	Update CATEGORIES as per ports/44331.	2002-10-21 10:59:11 +00:00
dna-qc	Add dna-qc 1993.07.26, a quality control algorithm for DNA	2001-12-19 03:20:48 +00:00
emboss	- Unbreak fetching of distfiles. (Needs update as soon as freeze is over.)	2002-09-27 08:58:19 +00:00
fasta	Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.	2001-07-03 09:08:26 +00:00
fasta3	Prefer <limits.h> over <values.h> as the latter has been removed from	2002-08-23 03:36:33 +00:00
fastdnaml	Add NOPORTDOCS support to pkg-plist	2001-07-08 18:15:34 +00:00
flip	Flip is used to find/translate orfs.	2002-09-10 14:04:06 +00:00
fluctuate	Add fluctuate 1.30, a program to fit population models.	2001-08-06 14:45:39 +00:00
gaussian98	Remove USE_NEWGCC, which is no longer supported or required.	2002-08-31 02:38:29 +00:00
genpak	Bump png major	2001-09-11 03:32:41 +00:00
gff2ps	- Install documentation	2002-02-13 02:54:31 +00:00
gperiodic	Deploy USE_GNOMENG infrastructure	2002-08-30 12:59:40 +00:00
grappa	- Update to version 1.0.3	2001-08-29 11:53:29 +00:00
hmmer	- Add patch that will, for -CURRENT only, change: -pthread -> -lc_r	2002-07-11 10:52:14 +00:00
kinemage	Update to version 5.79.	2000-12-11 03:10:04 +00:00
L-Breeder	Fix dependency on wxgtk	2002-10-19 09:50:53 +00:00
lamarc	Add lamarc 2001.08.06,	2001-08-07 08:17:58 +00:00
libgenome	- Support CXXFLAGS properly.	2002-08-17 19:16:55 +00:00
migrate	- Update to version 1.2.4	2001-08-22 14:43:45 +00:00
molden	Note distribution term.	2002-05-27 06:25:53 +00:00
mopac	Add NOPORTDOCS support to pkg-plist	2001-07-08 18:15:34 +00:00
nab	upgrade to 4.4	2002-07-16 06:18:16 +00:00
ncbi-toolkit	add forgotten "USE_REINPLACE=yes"	2002-09-21 14:56:18 +00:00
nclever	Add nclever 4.0, a character-based version of NCBI's Entrez program.	2001-09-26 09:22:02 +00:00
ortep3
p5-AcePerl	CC, CXX, CFLAGS, PTHREAD_CFLAGS and PTHREAD_LIBS may contain `/' in	2002-10-10 12:59:36 +00:00
p5-bioperl	- Update to version 0.7.2, somewhat overdue. :-)	2002-01-25 11:46:09 +00:00
p5-bioperl-devel	- Add NO_LATEST_LINK, which should've been there in the first place. :-(	2001-09-20 15:11:14 +00:00
paml	- Update to version 3.1	2001-08-29 12:00:08 +00:00
phylip	Update to version 3.6.a3.	2002-08-13 16:07:45 +00:00
pkg
platon	add USE_XLIB	2001-07-30 21:05:54 +00:00
povchem	Clean up inefficient perl invocations; use multiple REs in the same call.	2001-01-07 17:49:52 +00:00
primer3	add primer3 0.9	2002-09-17 15:31:09 +00:00
psi88	update WWW and master site	2001-10-22 06:36:14 +00:00
py-biopython	Use $PYNUMERIC in the dependencies.	2002-07-15 11:37:35 +00:00
pymol	o Fix examples directory path which is changed in last revision.	2002-08-26 05:13:28 +00:00
rasmol	Fix WWW.	2002-03-08 20:50:08 +00:00
recombine	Add recombine 1.40, a program to fit population models across sites.	2001-08-06 14:49:53 +00:00
ruby-bio	Use RUBY_MOD*.	2002-10-06 21:08:30 +00:00
seaview	Bump XForms lib. version.	2002-07-04 09:20:30 +00:00
seqio	Remove a redundant trailing space.	2001-10-21 07:55:45 +00:00
sim4	Update to sim4-2002.03.03 to unbreak build.	2002-05-04 21:45:10 +00:00
spdbv	Swiss-PdbViewer is an application that provides a user friendly interface	2002-04-02 16:18:53 +00:00
t_coffee	Add t_coffee 1.37, a multiple DNA or protein sequence alignment package.	2002-01-25 14:58:16 +00:00
tinker	Upgrade tinker to the latest revision	2002-01-19 15:15:16 +00:00
treeviewx	Chase new name of wxgtk shared library.	2002-09-09 14:21:08 +00:00
tRNAscan-SE	Add tRNAscan-SE 1.21, an improved tool for transfer RNA detection.	2002-03-27 14:18:49 +00:00
wise	"Wise2 is package that is focused on comparing DNA sequences at	2002-09-10 13:58:40 +00:00
xdrawchem	Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command;	2002-01-29 09:39:59 +00:00
xmolwt	Deploy USE_GNOMENG infrastructure	2002-08-30 12:59:40 +00:00
Makefile	Connect distribfold to build after moving it from misc category	2002-10-07 03:07:59 +00:00