Mario Sergio Fujikawa Ferreira f0a1969d34 o Rollback PORTCOMMENT modifications while this feature's implementation ... is better studied o Turn PORTCOMMENT variable in Makefile back into pkg-comment files Approved by: kris (portmgr hat), portmgr, re (silence)		2002-11-10 16:48:51 +00:00
..
artemis	Initial import of artemis 4.0	2001-12-22 14:39:40 +00:00
avida	Make biology/avida building on -current again	2002-11-03 23:40:02 +00:00
babel	o Rollback PORTCOMMENT modifications while this feature's implementation	2002-11-10 16:48:51 +00:00
biojava	Unbreak this port:	2002-06-16 01:08:49 +00:00
chemeq	upgrade to V110-1	2002-04-21 13:33:29 +00:00
clustalw	- Add a new patch	2002-03-27 14:01:57 +00:00
coalesce	Add coalesce 1.50, a program to fit population models.	2001-08-06 14:41:58 +00:00
crimap	Add crimap 2.4, a tool for the creation of multilocus linkage maps.	2002-03-27 14:42:56 +00:00
deft	PERL -> REINPLACE	2002-11-04 05:46:38 +00:00
distribfold	Update CATEGORIES as per ports/44331.	2002-10-21 10:59:11 +00:00
dna-qc	PERL -> REINPLACE	2002-11-04 05:46:38 +00:00
emboss	- Unbreak fetching of distfiles. (Needs update as soon as freeze is over.)	2002-09-27 08:58:19 +00:00
fasta	Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.	2001-07-03 09:08:26 +00:00
fasta3	Prefer <limits.h> over <values.h> as the latter has been removed from	2002-08-23 03:36:33 +00:00
fastdnaml	Add NOPORTDOCS support to pkg-plist	2001-07-08 18:15:34 +00:00
flip	PERL -> REINPLACE	2002-11-04 05:46:38 +00:00
fluctuate	Add fluctuate 1.30, a program to fit population models.	2001-08-06 14:45:39 +00:00
gaussian98	Remove USE_NEWGCC, which is no longer supported or required.	2002-08-31 02:38:29 +00:00
genpak	o Rollback PORTCOMMENT modifications while this feature's implementation	2002-11-10 16:48:51 +00:00
gff2ps	PERL -> REINPLACE	2002-11-04 01:56:21 +00:00
gperiodic	Deploy USE_GNOMENG infrastructure	2002-08-30 12:59:40 +00:00
grappa	- Update to version 1.0.3	2001-08-29 11:53:29 +00:00
hmmer	- Add patch that will, for -CURRENT only, change: -pthread -> -lc_r	2002-07-11 10:52:14 +00:00
kinemage	Update to version 5.79.	2000-12-11 03:10:04 +00:00
L-Breeder	Fix dependency on wxgtk	2002-10-19 09:50:53 +00:00
lamarc	Add lamarc 2001.08.06,	2001-08-07 08:17:58 +00:00
libgenome	Fix PORTCOMMENTs that were killing INDEX builds.	2002-11-07 03:10:58 +00:00
migrate	- Update to version 1.2.4	2001-08-22 14:43:45 +00:00
molden	Note distribution term.	2002-05-27 06:25:53 +00:00
mopac	Add NOPORTDOCS support to pkg-plist	2001-07-08 18:15:34 +00:00
nab	PERL -> REINPLACE	2002-11-04 01:56:21 +00:00
ncbi-toolkit	add forgotten "USE_REINPLACE=yes"	2002-09-21 14:56:18 +00:00
nclever	Add nclever 4.0, a character-based version of NCBI's Entrez program.	2001-09-26 09:22:02 +00:00
ortep3	File missing in pkg-plist	2000-10-30 15:36:57 +00:00
p5-AcePerl	CC, CXX, CFLAGS, PTHREAD_CFLAGS and PTHREAD_LIBS may contain `/' in	2002-10-10 12:59:36 +00:00
p5-bioperl	- Update to version 0.7.2, somewhat overdue. :-)	2002-01-25 11:46:09 +00:00
p5-bioperl-devel	- Add NO_LATEST_LINK, which should've been there in the first place. :-(	2001-09-20 15:11:14 +00:00
paml	- Update to version 3.1	2001-08-29 12:00:08 +00:00
phylip	Update to version 3.6.a3.	2002-08-13 16:07:45 +00:00
pkg	As threatened, enforce the "Capital, no period" rule. Ellipses are	1999-06-26 17:19:19 +00:00
platon	add USE_XLIB	2001-07-30 21:05:54 +00:00
povchem	PERL -> REINPLACE	2002-11-04 02:35:01 +00:00
primer3	Updated to fix problems as stated in PR ports/42915	2002-11-07 13:45:17 +00:00
psi88	update WWW and master site	2001-10-22 06:36:14 +00:00
py-biopython	Use $PYNUMERIC in the dependencies.	2002-07-15 11:37:35 +00:00
pymol	o Fix examples directory path which is changed in last revision.	2002-08-26 05:13:28 +00:00
rasmol	o Rollback PORTCOMMENT modifications while this feature's implementation	2002-11-10 16:48:51 +00:00
recombine	Add recombine 1.40, a program to fit population models across sites.	2001-08-06 14:49:53 +00:00
ruby-bio	Use RUBY_MOD*.	2002-10-06 21:08:30 +00:00
seaview	Update WWW	2002-11-07 23:13:11 +00:00
seqio	Remove a redundant trailing space.	2001-10-21 07:55:45 +00:00
sim4	Update to sim4-2002.03.03 to unbreak build.	2002-05-04 21:45:10 +00:00
spdbv	Swiss-PdbViewer is an application that provides a user friendly interface	2002-04-02 16:18:53 +00:00
t_coffee	Add t_coffee 1.37, a multiple DNA or protein sequence alignment package.	2002-01-25 14:58:16 +00:00
tinker	Upgrade tinker to the latest revision	2002-01-19 15:15:16 +00:00
treeviewx	Chase new name of wxgtk shared library.	2002-09-09 14:21:08 +00:00
tRNAscan-SE	Port needs perl to build.	2002-11-04 01:47:57 +00:00
wise	Modify replace RE to match syntax of sed now ("\)" -> ")"	2002-11-05 01:44:12 +00:00
xdrawchem	Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command;	2002-01-29 09:39:59 +00:00
xmolwt	Deploy USE_GNOMENG infrastructure	2002-08-30 12:59:40 +00:00
Makefile	Connect distribfold to build after moving it from misc category	2002-10-07 03:07:59 +00:00