1
0
mirror of https://git.FreeBSD.org/ports.git synced 2024-12-22 04:17:44 +00:00
freebsd-ports/biology
Jason Evans 91fb724efd Change CONFIGURE_ENV --> USE_CSTD. [1]
Add missing pkg-plist entry for Parsing.so. [2]

Change RUN_DEPENDS --> LIB_DEPENDS for optional math/atlas dependency.

Submitted by:	[1] erwin
Reported by:	[2] QAT
2009-06-10 01:25:02 +00:00
..
adun - fix build for custom LOCALBASE in UL subdir 2009-06-02 02:33:05 +00:00
ariadne
artemis
avida bump PORTREVISION after cmake update 2009-03-24 19:13:32 +00:00
babel
belvu
biococoa
biojava - Update to 1.7 2009-05-01 09:33:42 +00:00
blast
blat
boinc-simap
chemeq
clustalw
consed Welcome to the new linux ports infrastructure which allows using 2009-03-19 17:28:51 +00:00
crimap
crux Change CONFIGURE_ENV --> USE_CSTD. [1] 2009-06-10 01:25:02 +00:00
distribfold
dna-qc
dotter
embassy - Mark BROKEN does not compile 2009-03-23 21:56:39 +00:00
emboss - Update to 0.1.24 2009-03-14 15:17:06 +00:00
fasta
fasta3 - Update to 35.4.7 [1] 2009-06-09 07:53:37 +00:00
fastdnaml
finchtv
fluctuate
garlic
genpak
gff2ps
gmap
gperiodic
grappa
hmmer - Update download locations, update WWW 2009-02-01 08:17:14 +00:00
jalview
kinemage
L-Breeder Reset dyeske@gmail.com at his request. 2009-02-02 23:44:01 +00:00
lagan
lamarc - Mark most of my ports MAKE_JOBS_SAFE=yes 2009-05-16 06:27:56 +00:00
libgenome
libsbml LibSBML is an open-source programming library to help you read, write, 2009-05-28 23:36:10 +00:00
linux-foldingathome
lsysexp Reset dyeske@gmail.com at his request. 2009-02-02 23:44:01 +00:00
mafft - Update download locations, update WWW 2009-02-04 03:31:00 +00:00
mapm3
migrate
molden
mopac
mrbayes Fix LIB_DEPENDS on devel/readline: its sh lib version was bumped recently from 2009-05-12 11:28:17 +00:00
mummer
muscle
ncbi-toolkit - Update to 2009.03.01 2009-03-28 16:59:39 +00:00
njplot Convert most of remaining ports that depend on xorg-libraries to 2009-06-09 15:33:28 +00:00
ortep3
p5-AcePerl - Mark most of my ports MAKE_JOBS_SAFE=yes 2009-05-16 06:27:56 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das - Update to 1.11 2009-06-08 09:30:07 +00:00
p5-Bio-Glite Bio::Glite is an interface to G-language Genome Analysis Environment 2009-04-02 18:24:59 +00:00
p5-Bio-Graphics - Update to 1.95 2009-06-02 21:34:06 +00:00
p5-Bio-Phylo
p5-bioperl Remove variable PERL_VER from the ports tree at all - because 2009-03-05 17:56:24 +00:00
p5-bioperl-run - Update to 1.6.1 2009-03-19 20:54:05 +00:00
paml - Update to 4.2b 2009-03-02 19:02:48 +00:00
phd2fasta
phrap
phred
phylip
platon
povchem
primer3
protomol
psi88
py-biopython
pymol - Update lang/python26 and make Python 2.6.2 to the default Python version 2009-06-08 22:30:55 +00:00
rasmol Convert most of remaining ports that depend on xorg-libraries to 2009-06-09 15:33:28 +00:00
recombine
ruby-bio
seaview
seqio
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE
wise
xdrawchem
xmolwt
Makefile Add the biology/crux port. 2009-06-08 23:49:59 +00:00