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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-29 05:38:00 +00:00
freebsd-ports/biology
Patrick Li 672a625d5d Update to 2001.12.20
PR:		35203
Submitted by:	maintainer
2002-02-22 07:57:07 +00:00
..
artemis Initial import of artemis 4.0 2001-12-22 14:39:40 +00:00
babel * Replace pkg-message about setting BABEL_DIR with a wrapper script 2001-12-02 13:09:47 +00:00
biojava Style police: WWW tags should either end in a file/script or TRAILING /; Fix the later case 2001-11-20 23:29:38 +00:00
chemeq Add %%PORTDOCS%% suppor to pkg-plist. 2001-07-03 14:53:14 +00:00
clustalw ${PREFIX}/share/${PORTNAME} --> ${DATADIR} 2001-07-10 13:54:22 +00:00
coalesce Add coalesce 1.50, a program to fit population models. 2001-08-06 14:41:58 +00:00
deft Add %%PORTDOCS%% support to pkg-plist, and tweak Makefile slightly to support 2001-07-04 08:12:21 +00:00
dna-qc Add dna-qc 1993.07.26, a quality control algorithm for DNA 2001-12-19 03:20:48 +00:00
emboss - Update to version 2.2.0 2002-01-18 14:04:03 +00:00
fasta Replace erroneous usage of INSTALL_MAN with INSTALL_DATA. 2001-07-03 09:08:26 +00:00
fasta3 Replace erroneous usage of INSTALL_MAN with INSTALL_DATA. 2001-07-03 09:08:26 +00:00
fastdnaml Add NOPORTDOCS support to pkg-plist 2001-07-08 18:15:34 +00:00
fluctuate Add fluctuate 1.30, a program to fit population models. 2001-08-06 14:45:39 +00:00
gaussian98 Style police: WWW tags should either end in a file/script or TRAILING /; Fix the later case 2001-11-20 23:29:38 +00:00
genpak Bump png major 2001-09-11 03:32:41 +00:00
gff2ps - Install documentation 2002-02-13 02:54:31 +00:00
gperiodic Pass maintainership to submitter and add a backup master site. 2002-02-20 06:53:44 +00:00
grappa - Update to version 1.0.3 2001-08-29 11:53:29 +00:00
hmmer - Update port to version 2.2g 2001-08-22 13:18:10 +00:00
kinemage Update to version 5.79. 2000-12-11 03:10:04 +00:00
lamarc Add lamarc 2001.08.06, 2001-08-07 08:17:58 +00:00
migrate - Update to version 1.2.4 2001-08-22 14:43:45 +00:00
molden o update to 3.7. 2002-01-23 19:59:19 +00:00
mopac Add NOPORTDOCS support to pkg-plist 2001-07-08 18:15:34 +00:00
nab Style police: WWW tags should either end in a file/script or TRAILING /; Fix the later case 2001-11-20 23:49:34 +00:00
ncbi-toolkit Update to 2001.12.20 2002-02-22 07:57:07 +00:00
nclever Add nclever 4.0, a character-based version of NCBI's Entrez program. 2001-09-26 09:22:02 +00:00
ortep3 File missing in pkg-plist 2000-10-30 15:36:57 +00:00
p5-AcePerl - Update to version 1.82 2002-01-25 12:35:20 +00:00
p5-bioperl - Update to version 0.7.2, somewhat overdue. :-) 2002-01-25 11:46:09 +00:00
p5-bioperl-devel - Add NO_LATEST_LINK, which should've been there in the first place. :-( 2001-09-20 15:11:14 +00:00
paml - Update to version 3.1 2001-08-29 12:00:08 +00:00
phylip - Update to version 3.6.a2.1 - since the distribution tarball hadn't been 2001-08-22 10:02:27 +00:00
pkg
platon add USE_XLIB 2001-07-30 21:05:54 +00:00
povchem Clean up inefficient perl invocations; use multiple REs in the same call. 2001-01-07 17:49:52 +00:00
psi88 update WWW and master site 2001-10-22 06:36:14 +00:00
py-biopython - Update to version 1.00a4 2002-01-22 10:54:02 +00:00
rasmol Fix a buglet with the use of XFREE86_VERSION without including 2001-09-06 22:36:38 +00:00
recombine Add recombine 1.40, a program to fit population models across sites. 2001-08-06 14:49:53 +00:00
ruby-bio Update to 0.3.3. 2001-12-21 21:25:16 +00:00
seaview
seqio Remove a redundant trailing space. 2001-10-21 07:55:45 +00:00
sim4 - Update to version of 2001-12-30 2002-01-25 13:33:00 +00:00
t_coffee Add t_coffee 1.37, a multiple DNA or protein sequence alignment package. 2002-01-25 14:58:16 +00:00
tinker Upgrade tinker to the latest revision 2002-01-19 15:15:16 +00:00
treeviewx Update to 0.2. 2001-12-29 06:36:25 +00:00
xdrawchem Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command; 2002-01-29 09:39:59 +00:00
xmolwt o update to 0.7. 2002-01-23 19:52:38 +00:00
Makefile Add t_coffee 1.37, a multiple DNA or protein sequence alignment package. 2002-01-25 14:58:16 +00:00